KEGG   Coccidioides posadasii: 9691266
Entry
9691266           CDS       T01332                                 
Symbol
LSM2, D8B26_001778
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
cpw  Coccidioides posadasii
Pathway
cpw03018  RNA degradation
cpw03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    9691266 (LSM2)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    9691266 (LSM2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpw03019]
    9691266 (LSM2)
   03041 Spliceosome [BR:cpw03041]
    9691266 (LSM2)
Messenger RNA biogenesis [BR:cpw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     9691266 (LSM2)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     9691266 (LSM2)
Spliceosome [BR:cpw03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    9691266 (LSM2)
 Complex C
  U2 snRNP components
    9691266 (LSM2)
SSDB
Motif
Pfam: LSM LRR_9 SM-ATX Hfq
Other DBs
NCBI-GeneID: 9691266
NCBI-ProteinID: XP_003065796
UniProt: C5PGJ8
LinkDB
Position
1:join(6100819..6100832,6100915..6101165,6101252..6101283)
AA seq 98 aa
MLFFSFFKTLTNHTVIIELKNDIRIRGILKSVDQYLNIKLDDIEVIDLDKYPHLSSVKNI
FIRGSVVRYIVLPQEAVDRGLLEDATRREAASQANKAR
NT seq 297 nt   +upstreamnt  +downstreamnt
atgctctttttcagcttcttcaaaaccctcacgaaccataccgttatcatcgagctcaag
aatgatatccgcatccgcggcatcctcaagagtgtcgatcagtacttgaacatcaagctc
gatgatattgaggtcattgacctggacaaataccctcatctttctagcgtgaaaaatatc
tttatacgcggcagtgtggtgagatatatcgtcctgccgcaggaggctgtggacagagga
ctgctggaagatgcaactaggagagaggctgcaagtcaggcgaataaagcgagatga

DBGET integrated database retrieval system