Coccidioides posadasii: 9691566
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Entry
9691566 CDS
T01332
Symbol
SMD1, D8B26_002111
Name
(RefSeq) mRNA splicing protein smd1
KO
K11087
small nuclear ribonucleoprotein D1
Organism
cpw
Coccidioides posadasii
Pathway
cpw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
9691566 (SMD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpw03041
]
9691566 (SMD1)
03032 DNA replication proteins [BR:
cpw03032
]
9691566 (SMD1)
Spliceosome [BR:
cpw03041
]
Complex A
U1 snRNP components
Sm proteins
9691566 (SMD1)
U2 snRNP components
9691566 (SMD1)
Complex B
U1 snRNP components
9691566 (SMD1)
U4/U6.U5 tri-snRNP components
9691566 (SMD1)
Complex C
U2 snRNP components
9691566 (SMD1)
DNA replication proteins [BR:
cpw03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
9691566 (SMD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
9691566
NCBI-ProteinID:
XP_003066096
UniProt:
C5PHE8
LinkDB
All DBs
Position
1:join(7055059..7055072,7055169..7055218,7055353..7055651)
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AA seq
120 aa
AA seq
DB search
MKLVRFLMKCANETVTIELKNGTILHGTIASVSPQMNTALRTVKMTPKGREPISLDTINI
RGSTIRYFILPDSLPLDTLLIDDTPKPKNKAKKETDRGRGRGGPRGRGGRGRGRGRGRGF
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttgtccgatttcttatgaaatgcgcgaatgaaacggtcacaatcgaactaaag
aatggcacaatactacatggaacgattgcgtctgtttctccacaaatgaacactgccctc
cgcacggtaaagatgacgcccaaaggccgcgagccgatatccctcgacacaatcaacatc
cgcggttctacgattcgatatttcattctcccagatagtctaccgttggataccctcctt
atagatgatactccgaaacccaagaataaagcgaagaaagaaacggatcgtggacgtgga
cgaggcggtccgagaggtaggggtggcagagggagagggcgcggcaggggtcgtggtttc
taa
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