Coccidioides posadasii: 9691701
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Entry
9691701 CDS
T01332
Symbol
PFS2, D8B26_002265
Name
(RefSeq) pre-mRNA cleavage and polyadenylation factor (CPF) complex subunit
KO
K15542
polyadenylation factor subunit 2
Organism
cpw
Coccidioides posadasii
Pathway
cpw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
9691701 (PFS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpw03019
]
9691701 (PFS2)
Messenger RNA biogenesis [BR:
cpw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
9691701 (PFS2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WDR55
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_WDR41
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_1st
MIOS_WD40
Beta-prop_VPS8
eIF2A
Beta-prop_IFT122_1st
Beta-prop_SPT8
WD_LRWD1
Beta-prop_ACSF4
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
9691701
NCBI-ProteinID:
XP_003066231
UniProt:
C5PHT3
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All DBs
Position
1:join(7526802..7526871,7526928..7527043,7527116..7527316,7527384..7528718)
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AA seq
573 aa
AA seq
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MAFYDEGATESSFIPRPLGPRRPRPVTDYGSSLVQWMRVRQPKYKGGHRLEWERPSASYT
VDMLPPFAAIHSPADTIPVRHLHQSIGKSKKPITVVRWTPEGRRLLTGGHTGEFMLWNGT
AFNFETVMDAHYDQYQAGVTSAEWSHSHEWLISGGQKGDVKYWRPNFNNVETVDDAHHDA
VRDLAWCPNDTRFLSASDDTTLKIFDFNARACELVLAGHGWDVKSCDWHPTKGLLVSGSK
DHQVKFWDPRTGRCLTTLHSHKNTVTTTKFSRVNNNLLATSSRDQTGRIFDLRMMRDICI
LRGHEKPISSLTWHPIHSTLVSTGSEDGSLYHYLLDEPNLPAGQVPTVAPYDTTDPSNTP
AQVIFPAHRIQFAHSSTIWSLDWHPLGHILASGSKDNFTRFWSRTRPGETTYLKDRFHIG
EEAAEAQGTWNRGFGRRQMREEEEQEIQDEAEGLVDQKRPESLLPGIQGMPPPDGPGLPG
LIPGIGAVHPPPPPLPVDIPSSMPHIDPGRLAALLSSGAIPHPPPPQHLLPPQNPGQMPF
PIPGISGPFPPNPDFPQFPNQMFPPQPAHQQPK
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggcattttacgatgaaggcgcaacagaaagctcgttcattccccggccgctcggaccg
cgaagaccaagacctgtgacggactacggctcgtcgctagtacaatggatgcgtgtgcgc
caaccgaaatacaaaggaggccatcggttagaatgggagcgaccgagcgcgagttataca
gtggatatgctccctccttttgccgctattcattctcctgcagacacaattcctgtacgg
cacctacatcagtcgatcgggaagtcgaagaagccaattacggtcgtgagatggacacct
gagggtcgacgattattgactggtggacataccggagaattcatgctatggaacggtaca
gctttcaattttgaaacagtgatggacgcccattacgatcaataccaagcgggagtcacg
tcggcggaatggtcacatagtcatgaatggctgatatctggtggtcaaaagggcgacgtt
aaatattggcgaccaaattttaacaacgttgagaccgtagatgatgctcaccacgatgcc
gtccgggacttggcatggtgtcctaatgatacgaggtttctttccgcctctgacgacacg
acattgaagatcttcgactttaacgcaagggcctgcgaactggtattagcaggtcatggg
tgggatgtcaaatcctgcgattggcatcccactaaaggacttctcgtctcgggctcgaaa
gaccaccaggtcaagttctgggaccccaggacaggaagatgtctcactactctccatagt
cacaaaaatacagtgacaactacgaaattttctcgagtaaacaataatctcctcgccacg
tcttcgcgagatcagaccggacgcatttttgatctgcgaatgatgcgagatatctgcatt
ctccgaggccacgagaaacccatttcttccctgacctggcaccctattcacagtaccctt
gtatcaacgggaagtgaggacggatctttatatcactacctattggatgagcccaatttg
ccagccggacaggttcccaccgttgcaccatacgatactaccgatcccagcaacactcct
gcccaagtgatattcccggcccatcgcatacagtttgcccacagttctaccatctggtca
ctcgattggcatcctctaggccacatcttggcatctgggtccaaggataactttacccgg
ttttggtctaggactcggcctggcgagactacctatctgaaagacagatttcacattggc
gaagaagcggccgaagctcaagggacatggaatcgtggattcggtcgtcggcagatgcga
gaagaagaggagcaagaaattcaggatgaggctgagggtttggtggatcaaaaacgacct
gaatcgctgttacccggtattcagggtatgccgcctccagatggtcccggtctaccgggc
ttgattcctggaattggtgctgtacatccaccaccaccgccgcttcccgtcgatatacct
tcatccatgcctcatatcgaccccggtcgccttgctgctctgctgtcttccggcgcaata
ccccatcctccgccacctcagcatctccttcctcctcaaaacccgggccagatgcccttc
cccattccgggtatatctggaccattcccgcctaatcctgactttccacagttcccgaac
caaatgtttccgccacagcctgcgcatcaacaaccaaaatag
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