Coccidioides posadasii: 9691755
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Entry
9691755 CDS
T01332
Symbol
D8B26_002328
Name
(RefSeq) uncharacterized protein
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
cpw
Coccidioides posadasii
Pathway
cpw03030
DNA replication
cpw03410
Base excision repair
cpw03420
Nucleotide excision repair
cpw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
9691755 (D8B26_002328)
03410 Base excision repair
9691755 (D8B26_002328)
03420 Nucleotide excision repair
9691755 (D8B26_002328)
03430 Mismatch repair
9691755 (D8B26_002328)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpw03032
]
9691755 (D8B26_002328)
03400 DNA repair and recombination proteins [BR:
cpw03400
]
9691755 (D8B26_002328)
Enzymes [BR:
cpw01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
9691755 (D8B26_002328)
6.5.1.6 DNA ligase (ATP or NAD+)
9691755 (D8B26_002328)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
9691755 (D8B26_002328)
DNA replication proteins [BR:
cpw03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
9691755 (D8B26_002328)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
9691755 (D8B26_002328)
DNA repair and recombination proteins [BR:
cpw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
9691755 (D8B26_002328)
NER (nucleotide excision repair)
Other NER factors
9691755 (D8B26_002328)
MMR (mismatch excision repair)
Other MMR factors
9691755 (D8B26_002328)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
DUF3246
Motif
Other DBs
NCBI-GeneID:
9691755
NCBI-ProteinID:
XP_003066285
UniProt:
C5PHY7
LinkDB
All DBs
Position
1:join(7696669..7696706,7696853..7698265,7698322..7698856,7698921..7699151,7699207..7699752)
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AA seq
920 aa
AA seq
DB search
MAQKSERKQTTLGKFFGGNAASLPETKNQSTLSFSSEAGSAKSETKPAKDLQDNEDDDVD
MEDSSRDIPTKTGPVTPTKNGTVCSRPASPGAPRVDSDEEIKSESARSESASPSARKLKR
QKDSVVEESDGNESEPVTKRRRGPTKPKTESSTSKPAAGRKNRKASPRGKTNDKGATSTP
NKQLEINESAVGNAESSESDQDDLLSESSSEELDIKPEKEEKKKNTASKQRQKVQATLKS
SANDPYPDWKAGDPVPYAALCTTFSLVEMTTKRLAILAHCSLFLRQVLRLTPEDLLPTVQ
LMINKLAADYAGIELGIGESLIMKAIGESTGRSLAVIKADQHEIGDLGLVAAKSRSNQPT
MFKPKPLTVRGVHESLLAIAKMQGHGSQEKKVGGIKKLLSSADSATAGKGSKGIDITKNK
GGPSEAKYIVRFLEGKLRLGLADKTVLVALAHAMVAHETLSKGNKTPSAEQLAKGEAILK
QVYSELPSYEVIIPAMLEHGIFNLQENCKLQPGVPLKPMLAKPTKSISEVLDRFEGKDFT
CEYKYDGERAQIHYVSQDAIKDYTATAGTLQKDGKGLCAIFSRNSEDLSKKYPDVLDKLE
SWVRPGTKSFVLDCETVAWDLENKKVLPFQQLMTRKRKDVKAEDIKVRVCIFAFDILFLN
GAPTVKMTFRERRALLHETFVPTEGEFAFAQYGNTSNVEEIQTLLDESVKSSCEGLMVKM
LDTEESGYEPSKRSRNWLKVKKDYLAGIGDSLDLVVIGAYFGKGKRTSVYGAFLLAAYNP
STENYETICNIGTGFSDALLDELHKSLSPLAISQPKPFYSHSSVPKDQPDVWFEPRLVWE
VKAADLTISPRYRCASDEVMGMAGADGKGVSLRFPRYIKARDDKKPDQASTTRMVAEMYR
KQESVTKEDKGKGVDDDWEY
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaagagcgagagaaagcagactactttagggaagttctttggcggaaacgca
gcctcgctccccgaaacaaaaaaccagtctacactctctttttcatctgaagctggaagc
gcgaaatctgagacaaaaccggccaaagatctccaagataatgaagacgatgatgttgat
atggaagattcaagtcgcgatattcctactaagactggccccgtaacgccaacgaaaaac
ggaaccgtttgttcaaggccagcttctcctggggctcccagagtagattcagatgaagaa
attaaatccgagagtgcgaggagtgaaagcgcgtcgccaagcgcaagaaagcttaagcga
cagaaggattcagtggttgaagagagtgatggaaatgagagcgaacctgtcaccaaaagg
cgaagagggccaacgaaaccgaaaacagagagctctacatcgaagcctgccgctggaaga
aaaaacagaaaggcctcgccaaggggtaaaaccaatgataaaggcgctaccagcacaccc
aacaagcaactggagataaatgaatcagcagtcggaaatgcagagtcctcagaatctgac
caggacgatctattgtcagaaagtagctcagaggagctggatatcaaacctgaaaaagag
gaaaagaagaaaaacacagcatcaaaacaaagacagaaggttcaggcaaccttgaaaagc
agcgcaaatgatccatatccagattggaaagctggtgaccctgttccctatgccgccttg
tgcactacattttccctcgttgaaatgaccaccaaaagattggctattctagcccattgc
tctctattccttcgtcaagtcttacgattgactcctgaggatttacttccaacagtccag
cttatgatcaataagctagctgcggattacgccggtatcgagctcggaatcggcgagtcc
ttgatcatgaaagccatcggcgaatccaccgggcgtagtcttgccgtcatcaaagctgac
cagcatgagatcggggatctgggccttgtcgcggctaagagtcgatcaaatcagcccact
atgttcaaaccaaaaccattaaccgtgcgaggagtccatgagagtctcttggcaattgct
aagatgcaaggacacggatcccaggagaagaaagtcggaggtattaaaaagctcctttct
tcagctgattccgctacagctggaaagggctcaaaagggattgacatcacaaaaaataaa
ggcggtccgagtgaggccaagtatattgtccgatttttagagggcaagctgcggctaggt
cttgctgataaaaccgtcctcgtggctctagctcatgccatggtagcgcatgaaactttg
tcaaagggcaacaagacacccagcgctgagcagctagcaaaaggagaagctattcttaag
caagtatatagcgaattaccatcttacgaagtgattatccccgccatgctagagcatgga
atatttaaccttcaggagaattgcaaactgcagccgggggttccattaaagcccatgtta
gcaaaacccacaaaatccatttctgaagtcctcgaccgctttgaaggaaaagactttacc
tgcgaatacaaatacgacggtgaaagagctcagattcactacgtgtcacaagatgcaatc
aaggattatactgccacagctggaaccttacaaaaggatggcaaaggcctttgtgctata
ttttcccgtaactccgaggatctatctaagaagtatccagatgttcttgataagctggaa
tcgtgggtccggccaggaaccaagagctttgtcctggactgcgagactgtcgcatgggat
ctcgagaacaagaaggtcttgccattccagcaactcatgacacgcaagagaaaggacgtg
aaagccgaagacataaaagtccgcgtttgcatattcgcgttcgatatcctgttcttgaat
ggagcacctactgtgaaaatgacattccgggaacggcgtgctcttttacatgaaacattt
gtcccaaccgaaggggagtttgctttcgcacaatatggaaacacgagtaacgtggaagag
atccaaactctcttagacgagagtgtgaagtcttcttgcgaaggtttgatggtaaagatg
ctagataccgaagaaagtggctatgaacctagtaagcggagtcgcaattggctcaaggtc
aaaaaggactatcttgctggtattggtgactcgctcgaccttgttgtcatcggcgcctac
ttcggcaagggtaaacgtacttcggtctacggagcctttctcctcgctgcgtacaaccct
agcactgaaaattacgagacaatatgcaatatcggtacgggcttctctgatgccctattg
gacgaacttcacaaatctctcagtcccctcgccatatcccaaccaaaaccgttttactcg
cattcttccgtccccaaggaccagccagatgtctggttcgaacctcgcctagtatgggag
gtcaaggcggcggatttaaccatcagtccccgatataggtgtgcgagtgacgaagtgatg
gggatggcgggtgcggatggaaagggggtctcgctacggtttccaaggtatatcaaagca
agagatgataaaaagccagaccaggcgagcacgactaggatggtagcggagatgtatcga
aagcaagagagtgtgacaaaagaggacaagggcaagggagtggacgatgactgggagtac
tag
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