Coccidioides posadasii: 9691940
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Entry
9691940 CDS
T01332
Symbol
SPT6, D8B26_005449
Name
(RefSeq) Transcription elongation factor spt6
KO
K11292
transcription elongation factor SPT6
Organism
cpw
Coccidioides posadasii
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpw03021
]
9691940 (SPT6)
03036 Chromosome and associated proteins [BR:
cpw03036
]
9691940 (SPT6)
Transcription machinery [BR:
cpw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
9691940 (SPT6)
Chromosome and associated proteins [BR:
cpw03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
9691940 (SPT6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HTH_44
HHH_7
Spt6_S1
YqgF
SPT6_acidic
Tex_central_region
HHH_3
HHH_9
SH2
S1
ARM_ECM29_C
Tex_YqgF
B12-binding
Motif
Other DBs
NCBI-GeneID:
9691940
NCBI-ProteinID:
XP_003066470
UniProt:
C5PIH2
LinkDB
All DBs
Position
3:complement(join(1512257..1512513,1512568..1516237,1516314..1516493,1516550..1516720))
Genome browser
AA seq
1425 aa
AA seq
DB search
MSAAELLENEALLDDEENDEDYDEETGEVARGTADRNGHYDDSSEEDEDEDEDAARAVRE
GFIVDEDEEEEETSERRREKKKRRREERALEDEDLDEEDIYLIGENNPDFEPPVSYESKF
KRLKRGHKGDRDRAVSQGINDIFNSDEEEDEIDRYRMGARDRRGLHDDLDDFIEEDVFSD
EERERMREDEEIARPVKKGISGLAVTEATGLDEAALEDMRAAFGDGTDYLFALEMEEDED
EEERGDEEKPLDLKDVFEPSQLAEKMMTEEDNEIRFSDEPERYQIARKPYKHVILSEEQF
KEEAIWISNLMLLKKRLEPDLREPFQRAIVKVLEFMVTDDWEVPFIFQHRKDYLIHAAKV
PMSPSAPNPDGQDYVIRAEKLLNMTDLWDIFEYDLKFRALVDKRNILQRTYDNLKNVANV
KDEVFEQMLPAAVTMEELQDLQDYIYFEYSSELKDVAMVNGNGENGAVHQRRKAATKTFY
ERIRNSKAYGLVRAFGITPDGFAQNAMKEAKRHHIDDPTELPEDMADGLLDTHFANGLHA
LKAAKTMFAEQLIMSPKVRKELRRAFYMNGVIDCFRTEKGLKKIDEHHPYYEFKYLRNQQ
LSDIARRPELFLRMLKAEEEGLVDVNVRFQNFDNYKRRLYRDIQSDNFSEVADAWNKARK
EVLDMALARLDKIMSRGVKENIKTECENHVAKECREAFSLRLDQAPYKPKGMILGTIPRV
LTLSAGAGIIGKDPIYWAWVEEDGRVLENGKFTDLTLGDPDRMISDGRDVNSLIDLVERR
KPDVIGISGMSPETRKLYKQLAELIDAKNLRSSPYTNDNDDEVSDPLEVVIVNDEVARLY
HTSDKARSEHPGLHPLTIYCVSLAKYLQNPMKEYASLGRDIVSIQFKPGQQLISQEKLLK
QLESALVDMVNLCGVDINEAVNDPATANLLTYVSGLGPRKASQLLKIINMNGGVVNNRME
LLGVNAQYPAMGVKVWNNCASFLYIDYDTADPDTDYLDNTRVHPEDYDIGRKMAADALEL
DEEDIKAETDENGPGAIVRKLVKEDAQEKVNDLILEEYAEQLEKNLNQRKRATLETIRAE
LQQPYEELRKQFVFLSTDAIFTMFTGETADTLAEGMVVPVTIKRITDDHIDGKLDCGVDV
LIPEMELTDRYDIPVRSLYSIHQTVPAKLLYLNRKAFIANASLREDQVIRPYRREFDHMR
DEWDDKQEHQDQEAMKEETKTSTRTLRVIKHPLFRPFNGPQAEEFLASQSRGDAVIRPSS
KGPDHLAVTWKVSDGVYQHIDVLELDKENEFSVGKILKIGGKYSYSDLDELIVNHVKAMA
RKVDDMTIHEKYQSGSKEATERWLTTYTTANPTRSAYAFCIDPKHPGYFHLCFKAGQNAS
MNSWPVKVIPQGYELQRNPYPDMMALCNGFKTMYANVLAGKKGRR
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgccgagcttttagagaatgaggccttgttggacgatgaggaaaatgatgaa
gactacgacgaggagaccggtgaagtagctagaggcactgccgatcgaaatggccactat
gacgattccagtgaggaggatgaagacgaagatgaagacgccgctcgtgctgttcgcgag
ggtttcattgtcgacgaagacgaagaagaggaagagacgtctgaaagacgacgagaaaag
aaaaagcgacgccgtgaagagcgtgcactcgaggatgaggacctggacgaggaagatatc
tatcttatcggggagaataacccggactttgaacctcctgtttcttatgagtcgaaattt
aagcggctgaagcgcgggcataaaggtgatcgagaccgtgcggtgtctcagggaatcaac
gatatattcaactccgacgaagaggaggatgagatcgaccgatatcggatgggtgcccga
gatagaagggggcttcacgatgacctcgatgatttcatcgaagaggatgtgttttccgac
gaagagcgcgagcgcatgcgggaagacgaagagatcgctcgcccagttaaaaaaggaatc
tctggacttgctgttacggaggcgactggcctcgatgaagctgccctcgaggatatgcgt
gctgctttcggtgatggaaccgattatctcttcgcccttgaaatggaagaagatgaagat
gaagaagaacgtggggatgaagaaaagccactggacctaaaagatgtttttgagccatca
caactcgctgaaaagatgatgacggaggaagacaacgagatccgctttagtgacgaaccc
gagcgctaccagatagcaagaaagccttataagcacgtcatcctgagcgaagaacaattt
aaggaagaagccatatggatttcaaatcttatgttactgaaaaagcgcctggaaccagac
ttacgcgagccattccagagagctattgtcaaggtccttgaatttatggttactgatgac
tgggaagtgccgttcatctttcaacatcgcaaggattacttgattcatgcggcaaaggtt
ccaatgtcccctagcgcacccaatcccgatgggcaggactacgttattagagcagagaaa
ctcttaaacatgactgatctgtgggatatcttcgagtatgacctaaagttccgcgcactt
gttgacaagaggaacatccttcagcggacctatgacaaccttaagaacgtcgcaaacgtc
aaagacgaagtgtttgagcagatgttacctgctgcggtgaccatggaggaacttcaggac
ctccaggattatatctattttgagtactcatccgaacttaaagatgttgcgatggtgaat
ggaaatggagagaatggggccgttcatcaacgccgaaaagccgcgaccaaaactttctat
gagcgtatccgcaatagcaaggcttacggtcttgttcgtgcgttcggaattacaccagac
ggatttgcccaaaacgctatgaaggaagcaaagagacatcatattgatgaccccactgag
ctacccgaagatatggcggacgggctccttgacactcactttgcaaacggtttacacgcg
ctcaaggctgccaagacaatgtttgcagaacagttgataatgagcccaaaagtaaggaag
gaattaagacgagccttctatatgaatggcgttatcgattgtttcaggactgaaaagggc
ctaaaaaagattgatgaacatcacccttattacgaatttaagtatttgcgaaatcagcaa
ctgagtgacattgcacgccgaccagaattattcctgcgcatgctgaaagcggaagaagaa
ggcttggtggacgtcaacgttcggttccaaaattttgataattataagagacgactctat
cgtgatatccaatccgacaacttcagtgaagtagccgatgcctggaacaaagcgagaaag
gaagtgcttgacatggcacttgcacggctcgacaagatcatgagtcgcggagtcaaggaa
aatatcaagactgaatgtgagaaccacgtcgctaaggaatgccgagaagctttctcctta
cgactcgatcaagctccgtacaagcctaaaggcatgatccttggcactattccccgtgtc
ctcactttatcagccggtgctggtatcattggcaaagacccaatatactgggcgtgggtt
gaagaggatggccgagtcttggaaaacggcaaatttaccgacctcactcttggtgatcca
gaccgcatgatttcagacggtagagacgtgaactctctcatagatctcgtcgaacggcgc
aaacctgatgtgattggcatttccgggatgtctccagaaacccgcaaactttacaagcaa
ctcgcagagctcatagatgcaaagaatctccgcagctcgccatataccaacgataatgat
gatgaagttagcgatcctctcgaagtagtcatagtgaacgacgaagtggcaagactatat
cataccagcgacaaggccagatcagagcaccccggtcttcacccattgaccatctactgc
gtttctctcgccaaatatctacagaatccaatgaaagagtacgcttcgttaggacgggac
atagtgtctattcaattcaaaccaggccagcaacttatctctcaggagaagctcttgaag
caactcgaaagtgctttggttgatatggtgaacttatgtggtgtggatatcaatgaagct
gtcaatgatccggctaccgccaaccttctcacttatgtgagcggtctcggccctcgaaag
gcctcccagttgctgaaaatcatcaacatgaacggtggtgttgtgaataaccgcatggag
ttactaggagtcaacgcgcagtatcctgcaatgggcgtgaaagtatggaacaattgtgcc
agttttctctacatcgactacgacacggccgatcccgacactgattatttggacaatact
cgtgttcatccagaagactatgatattggtcgcaagatggccgccgatgcgctcgaactc
gatgaagaagatatcaaagcggagacagatgagaacggtcccggcgctatcgttagaaag
ctcgttaaggaggatgctcaagaaaaagtcaacgaccttattctggaagagtatgccgag
caactcgaaaagaatcttaaccagagaaaacgcgctactcttgagactatacgtgctgaa
ttacagcagccttatgaggaattacgaaagcaattcgtcttccttagcacagatgccatc
tttacaatgtttaccggcgagactgcggacaccttggctgaaggcatggttgtacctgtc
actatcaaacgaataaccgatgaccacatcgacggcaaacttgactgtggagttgatgtc
ctcatacccgagatggagctcaccgaccgatatgatatccccgtccgaagtctatattcc
attcaccaaactgtccctgcgaaactgctctacttgaaccgcaaagctttcattgccaac
gcatctctccgcgaagaccaggtcattaggccgtatcgccgcgaattcgatcatatgcgc
gatgaatgggatgacaagcaagagcaccaagatcaagaagcaatgaaggaggagactaag
acgagcactcgtacactcagagttattaagcatccgcttttccgcccattcaatggtcct
caggctgaggaattcctcgcttcgcaaagtcgtggagacgcagtcattcgaccttcgtct
aagggccctgaccatctcgcagtgacatggaaggtctcagatggagtataccagcatatt
gatgtgttagaacttgacaaagaaaacgagttctccgtcggcaaaattctcaaaattggc
gggaagtattcgtacagcgatcttgacgagttgattgtcaatcatgtcaaggccatggca
agaaaggtggatgatatgacaatccatgagaaatatcagtccggctcaaaagaggctaca
gaacgttggttaacaacatacacaaccgccaaccctactcgttctgcctacgccttttgc
atcgaccccaaacacccgggctacttccacctgtgcttcaaggcgggccaaaatgcgtca
atgaacagctggccagtaaaagtgattccccagggatacgaattgcaacggaacccatat
ccagacatgatggcgttatgcaacggattcaagacgatgtatgcgaatgtgttggccgga
aagaagggacgaagatga
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integrated database retrieval system
