Coccidioides posadasii: 9692218
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Entry
9692218 CDS
T01332
Symbol
DBP5, D8B26_005053
Name
(RefSeq) RNA helicase required for poly(A+) mRNA export
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
cpw
Coccidioides posadasii
Pathway
cpw03013
Nucleocytoplasmic transport
cpw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
9692218 (DBP5)
03015 mRNA surveillance pathway
9692218 (DBP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpw03019
]
9692218 (DBP5)
Enzymes [BR:
cpw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
9692218 (DBP5)
Messenger RNA biogenesis [BR:
cpw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
9692218 (DBP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF3217
CMS1
AAA_11
Motif
Other DBs
NCBI-GeneID:
9692218
NCBI-ProteinID:
XP_003066748
UniProt:
C5PF23
LinkDB
All DBs
Position
3:complement(join(450062..450322,450384..450584,450641..450878,450931..451422,451489..451681,451772..451874))
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AA seq
495 aa
AA seq
DB search
MASENTTETPSVPAGGPLAARISRPEGDANPPSTEAEKPAAEDDSGKGPSIPQVDGASED
QRGSELQDSEFDVNVKLSDLQADPNNPLYSIKSFEELGLAEPIQMGLSKMNFRRPSKIQE
RALPLLMANPPTNMIAQSQSGTGKTAAFVLNILSRLELTPEKQKSPQALVLAPSRELARQ
IVGVIQAMGTFVEGLFVATAVPMEMNRNQRVEASIVVGTPGTVQDLIKKRLFNTQHLRVL
VLDEADNMLDQQGLGDQCIRVKSLLPRTIQVVLFSATFPDFVVRYAHKFAPNSNQLTLKH
EELTVEGIKQLYLDCESDEHKYEILVKFYGLLTIGSSIIFVKTRASAAEIERRMVAEGHT
VVSLTGGIEGQKRDEIIDRFRNGTAKVLITTNVLARGIDVSTVSMVINYDIPELHLPGAA
RRMADAQTYLHRIGRTGRFGRVGVAVSFVSNQEEWQMLQDIQKYFSTNIERVDTRDWDDV
EKKVKKIIKPSAVAR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgaaaacacaacagaaacacccagtgtaccagctggcgggccacttgcagct
cggatctccagaccagagggcgatgccaacccaccttctaccgaggcagagaagccggcc
gctgaggatgattccggaaaaggcccttcgatcccacaagtggacggagcttcagaggat
cagcgtggctctgaattacaggattccgaatttgacgtcaatgtcaagctgagcgatttg
caagcggatccgaataaccccctctattccatcaagtcgtttgaggagctaggcctagcg
gaacctattcaaatggggctgtccaagatgaacttccgtcgtccttccaagattcaggag
agagccttaccgcttctcatggcaaaccctccgacaaacatgatcgcccaatcgcaatct
ggtaccggaaagacagcagcgttcgttttgaatatccttagtcgcctcgagttgaccccg
gagaagcagaaatccccccaagccttagttcttgcaccgagtcgagaactggcaagacaa
attgttggagtcattcaagcaatgggaacatttgtcgaaggactctttgtggcgaccgct
gttcccatggaaatgaatcgcaatcaaagggtcgaagcatccatagtcgttggcacgcct
ggaactgttcaagacctcattaagaagagactattcaacacacagcatctcagagttttg
gtcttggatgaggcagacaatatgttggatcagcaaggtcttggtgatcaatgcattaga
gtgaaaagtttgctgccaagaacaattcaggtcgtcctgttttccgcaaccttccctgac
tttgttgttcggtatgcacataaattcgcgccgaattcaaaccaactgacgcttaaacac
gaggaacttaccgttgaaggcattaaacaactctacttggattgtgaatcagatgagcat
aagtatgaaattttggttaagttctatggactgcttacaattggatcttctatcattttt
gtcaagacacgtgcttcagctgcggagatcgagcgacgtatggtggcagaaggtcataca
gtagtttctttgaccggtggtatcgaaggacaaaagcgcgatgaaatcatcgatcgcttc
cgcaatggcacagcgaaggtcctcataacgaccaatgttttagctcgaggaattgacgtg
tccactgtttcaatggttatcaactatgatattccggaactacaccttcctggggcagct
cgccgcatggcggatgcacaaacctaccttcaccgcatcggacgtactggccgcttcgga
cgcgttggtgtggccgtgtcattcgtttctaaccaggaggaatggcaaatgctccaggat
atccagaaatacttcagcaccaacatcgagcgcgttgatacccgagattgggacgatgtg
gagaagaaggtcaagaaaataattaagccttctgccgttgcccgttaa
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