Coccidioides posadasii: 9692596
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Entry
9692596 CDS
T01332
Symbol
TFB4, D8B26_007561
Name
(RefSeq) RNA polymerase II transcription factor B subunit 4
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
cpw
Coccidioides posadasii
Pathway
cpw03022
Basal transcription factors
cpw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
9692596 (TFB4)
09124 Replication and repair
03420 Nucleotide excision repair
9692596 (TFB4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpw03021
]
9692596 (TFB4)
03400 DNA repair and recombination proteins [BR:
cpw03400
]
9692596 (TFB4)
Transcription machinery [BR:
cpw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
9692596 (TFB4)
DNA repair and recombination proteins [BR:
cpw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
9692596 (TFB4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
9692596
NCBI-ProteinID:
XP_003067125
UniProt:
C5PD19
LinkDB
All DBs
Position
4:complement(join(2222549..2223699,2223822..2223858))
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AA seq
395 aa
AA seq
DB search
MNPVDSSDHFEADTAASLLTIVLDTNPHAWALLEDTLPLSTAVANLLVFVNAHLACNYAN
KVAVVASHSQEARWLYPTPTTASSNTNQDEPADTDGDVAMSSTTGESPASNKYRPFRIVE
EQLTRNLKALLATTSPASVSSATSTMMAGALTLALSHINRETIAYAETHGTSRLDSDPSN
PTPTATGLPPPPGSHPDPTSQSSRSSPTGLQSRILIISVSSATGSAHQYIPIMNSIFACQ
RLHIPIDICKLSGDAVFLQQACDATRGIYVPVDHPRGFLQYLMVAFLPDQRSRRHLILPT
RVDVDFRAACFCHRKVVDVGFVCSICLSIFCEPPEGADCLTCGTHLELGDYGAKPVVIAK
KKKRKKGATKALVANGGSSGGATPISNPTSTPTLP
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctgttgattcttccgatcactttgaagctgataccgctgcatcactcctaacc
attgtgctcgacaccaacccgcacgcttgggccctgctagaagacaccctcccactctcc
acagctgtcgccaatctcctcgtcttcgtcaacgcccatctcgcttgcaactatgcgaac
aaggtggctgttgtcgccagccactcccaggaggcccgatggctgtatccgaccccaacc
acagcctcatccaacacaaaccaagatgagccagcagacacagacggagacgtcgccatg
tcttccacaacaggcgaaagcccagcatccaacaaataccgccccttccgcatcgtcgag
gagcaactaacccgcaacctcaaagccctcctcgccacaacctccccggcctccgtcagc
tccgccacctcgaccatgatggccggcgctctcacccttgccctgagccacataaaccgc
gagacaatcgcctacgccgaaacccacggcacttccagactcgacagcgatccttccaat
cccaccccgacggccaccggcctccctccaccaccaggctcccacccagacccaacctca
caatcatcccgctcctccccgaccggcctccagtcccgcatcctcataatctccgtaagc
agcgccacgggctcagcccaccagtacatccctatcatgaacagtatcttcgcctgccag
cgcctgcatatccccatcgacatctgcaaactctccggcgatgccgtcttcctccagcaa
gcctgcgacgccacccgcggcatctacgttcccgtagaccacccccgcggattcctacag
tacctcatggtggctttcctcccggaccagcgctcacggcgacacctgatcctgcccacg
cgcgttgacgttgacttccgcgccgcctgcttctgccaccggaaggtcgtcgatgtgggc
ttcgtctgcagcatttgcctgagcatcttctgcgagcctccagagggcgcggactgtctg
acctgcggtactcacttggagttgggagattacggtgcgaagccggttgtcatcgcgaag
aagaagaagcgtaaaaagggtgctacaaaggccctcgtcgcaaatggaggctcgtctggc
ggagcgactccaatttctaatccaacatcaacacctactttaccttag
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