| Entry |
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| Symbol |
CDC48, D8B26_007790
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| Name |
(RefSeq) AAA ATPase cdc48
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| KO |
| K13525 | transitional endoplasmic reticulum ATPase |
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| Organism |
cpw Coccidioides posadasii
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| Pathway |
| cpw04141 | Protein processing in endoplasmic reticulum |
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| Brite |
KEGG Orthology (KO) [BR:cpw00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
9692794 (CDC48)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cpw03019]
9692794 (CDC48)
03009 Ribosome biogenesis [BR:cpw03009]
9692794 (CDC48)
04131 Membrane trafficking [BR:cpw04131]
9692794 (CDC48)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:cpw04147]
9692794 (CDC48)
Messenger RNA biogenesis [BR:cpw03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
9692794 (CDC48)
Ribosome biogenesis [BR:cpw03009]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
9692794 (CDC48)
Membrane trafficking [BR:cpw04131]
SNARE
SNARE associated proteins
Others
9692794 (CDC48)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
9692794 (CDC48)
Exosome [BR:cpw04147]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
9692794 (CDC48)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
4:join(2861967..2862016,2862087..2862114,2862178..2862233,2862319..2862568,2862644..2864135,2864199..2864770)
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| AA seq |
815 aa
MSAEPDHSHHKHKVNLNDPSGAEKKDELDTATAILKKKKKPNSLIVTDAVNDDNSVIALS
NNTMETLQLFRGDTVLVKGKMRRDTVLIVLADDDLDDGSARINRVVRHNLRVKHGDVITV
HPCPDIKYAKRIAVLPIADTVEGLTGSLFDVFLAPYFREAYRPVRQGDLFTVRGGMRQVE
FKVVEVDPPEYGIVAQDTVIHCEGEPIQREDEEGNLNDVGYDDIGGCRKQMAQIRELVEL
PLRHPQLFKSIGIKPPRGILMFGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGES
ESNLRKAFEEAEKNSPAIIFIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVV
VMAATNRPNSVDPALRRFGRFDREVDIGIPDPTGRLEILQIHTKNMKLAEDVDLESIAAE
THGYVGSDLASLCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTMENFRFALGVSNPS
ALREVAVVEVPNVRWEDIGGLETVKRELIESVQYPVDHPEKFLKFGLSPSKGVLFYGPPG
TGKTLLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDS
IAKSRGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDAALCRPGRLDT
LVYVPLPNEAERVSILKAQLRKTPVAPDVDLEFIASKTHGFSGADLGFVTQRAAKLAIKQ
AISMEIERTKEREAAGEDVMDEDMDDPVPELTRAHFEEAMQMARRSVNDTEIRRYEAFAQ
SMKNSSGSNFFRFPTEQEAGQAGFGDAGNDDSLYD |
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| NT seq |
2448 nt +upstreamnt +downstreamnt
atgtctgccgaaccagatcactcccaccacaagcacaaggtcaacctgaatgatccttca
ggtgcggaaaagaaagatgaacttgatactgccaccgccatcctcaaaaagaagaagaag
ccaaactcgttgattgtcactgacgccgtcaacgatgacaactctgttattgcgctttcc
aacaacaccatggagaccctccagctcttccgtggcgatacagtcctcgtgaaaggaaag
atgcgcagagataccgttttgatcgtccttgcggatgatgatcttgatgatggaagtgcg
cgtatcaaccgcgtcgttcgacacaaccttcgcgtcaagcatggggatgttatcaccgtc
catccttgcccagatatcaaatatgccaagcgcatcgccgttctcccaatcgcagatacc
gtcgaaggtttgaccgggtctctattcgatgttttcctcgcaccatatttccgcgaagcc
tacagacccgttcgacaaggcgacctgttcactgttcgtggtggtatgcgtcaagtcgaa
tttaaggtcgtggaggtcgatcccccggaatatggcatcgtagcccaagacaccgtgatc
cactgcgagggtgaacccatccagcgtgaggatgaggagggaaacctcaatgatgttggc
tacgatgacattggtggctgccgaaaacagatggctcagatccgagaacttgtcgaactt
ccccttcgacacccacagctctttaagtctattggtatcaaacctcctcgtggcattctc
atgttcgggccacctggtaccggtaagaccttgatggctcgtgccgtcgccaacgaaact
ggtgccttcttcttcctcatcaacggtcctgagattatgtcaaagatggccggtgaatcc
gaatcaaatctgcgcaaagccttcgaggaagccgagaagaactcacctgcaattatcttc
attgatgaaattgactcgattgctcccaagcgtgataagactaacggtgaggtcgaacgc
cgcgtcgtttcccagctccttaccttgatggacggcatgaaggctcgctccaatgtcgtt
gtcatggcagccacaaaccgccccaactccgttgatcccgctcttcgtcgttttggacgt
ttcgatcgtgaggttgacattggtatccctgacccaactggacgtctagagatccttcag
attcacacgaagaacatgaagcttgctgaagacgtcgatctcgaatccattgctgcagaa
acccacggttatgttggctctgatcttgcgtccctctgctcggaggctgccatgcagcaa
attcgtgagaagatggatctcattgatctcgatgaagacaccatcgatgctgaagtcctt
gattcattgggtgtgaccatggagaacttccgttttgcccttggtgtttctaatccctct
gccctccgcgaagttgccgttgttgaagttcccaatgttcgctgggaagatatcggtgga
ctggaaactgtcaagagagagctcatcgagagtgtccagtaccccgtcgaccaccccgag
aagttcctcaagtttggtctttcaccgtcgaagggtgtcttgttctatggcccaccaggt
actggtaaaacactcctcgccaaggccgttgccaatgaatgcgctgcaaatttcatctct
gtcaagggtcccgaattgctgagcatgtggttcggtgaatccgaaagtaatatccgcgat
atcttcgacaaagcgcgtgcagctgctccctgtgtcgtctttttggacgaacttgattcc
attgccaagtctcgcggtggatctgtcggtgatgccggtggtgcttcggaccgtgttgtc
aaccagcttctgacagaaatggacgggatgacttccaagaagaacgtgttcgtcattggt
gccactaatcgtcctgaacagctcgatgctgccctgtgccgccctggccgtttggacact
cttgtttatgtgcccctccctaacgaggctgagcgcgtttccatcttgaaagctcagctt
cgaaagacacctgttgctcccgatgtcgacttggagttcattgctagcaagacccacgga
ttctccggtgctgatctcggtttcgttacgcaacgcgctgccaaacttgccattaagcag
gccatctccatggaaatcgagcggaccaaggagcgggaggctgcgggtgaggatgtcatg
gatgaggatatggatgacccagttccagaacttactcgcgcccacttcgaggaggccatg
cagatggcgcgccgatccgtcaacgacacggagatccgtcgatacgaagctttcgcacag
agcatgaaaaactccagcggcagcaatttcttccgattcccaactgaacaggaagccggt
caggctggattcggtgacgctggcaacgatgatagtctttacgattaa |
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