Coccidioides posadasii: 9692808
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Entry
9692808 CDS
T01332
Symbol
D8B26_007804
Name
(RefSeq) uncharacterized protein
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
cpw
Coccidioides posadasii
Pathway
cpw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
9692808 (D8B26_007804)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpw03019
]
9692808 (D8B26_007804)
Enzymes [BR:
cpw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
9692808 (D8B26_007804)
Messenger RNA biogenesis [BR:
cpw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
9692808 (D8B26_007804)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
9692808
NCBI-ProteinID:
XP_003067337
UniProt:
C5PDN1
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All DBs
Position
4:complement(join(2901828..2902390,2902443..2903058,2903112..2903338,2903413..2903505,2903560..2903812))
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AA seq
583 aa
AA seq
DB search
MEVTKSSFGQALPRILNDIAESCCVALDLEFSGIFSKQDRKPSTDGSSGGGRTLQSRYEE
VKEAAEKYQILQVGLTFIREDVDRGTYTLRPYNFNLNPIIDPKLDLERTWTCQSSAIDLL
LRSGFRMDAPFIDGVPYISREEEGMAKARVRDRQSRLAAMDNINFDSLDTESMAFLEEAR
RLINDWVSKPNRKEEYVNIPSAEKRSANQPGINNYQKRLIHQLVRSEYPDLVSIGRAMFV
QIVKYDKKRELNVQEGRMRQVRERIYNQTGFRWIVEAMTGGDLSRLSSDSVADSSRDPHG
RKQKAFGHIDYLQAKLKSKRLVLVGHNIFTDLVNFYKCFIGGLPDKVEEFLGNVHELFPM
IVDTKYLATHDCGSALPSSALEELDESLRFRELPTFTTDAQHTKYVDEKPVHEAGYDSLM
TARVFLRLASQLHAKGVVTEGASEQASCDGEGGGVSLGTGDILAKGLDIPSSRSVEETLV
IRERECSQTPVTVTRQQPVIAHATKFDILADQPDDISEYLGSDDDSVEEDSFLTSGGDLT
IDSKIKHGKLLPRLDNEFWKVYGNKLRMFGIAERFCELRLHDK
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgaccaagtcttcattcggccaggcccttcccaggattctaaacgacatagct
gagtcctgttgtgtggctctggacctggaattttctggtatctttagcaagcaagatcga
aaaccctctacggatggttcctcgggtggtggcagaactcttcagtcaagatacgaagag
gtcaaggaagctgcggagaagtaccaaattctccaagtcgggttaacctttattagagag
gatgtggataggggaacttatacccttcgtccgtataatttcaatttgaatccaataatc
gatccaaagttggacttggagaggacatggacgtgtcaaagcagtgcgatcgatctgctc
ctgcgtagcggatttcgcatggatgcgccctttatagatggcgtcccgtatatatcgaga
gaggaagaaggaatggcaaaagcgagggttcgtgacagacaaagtcgtctagccgccatg
gataatataaacttcgacagtctagatacagagtctatggcatttttagaagaggctcgc
cgcttgatcaatgactgggttagcaaacctaataggaaagaagaatacgttaatattccc
agcgccgaaaagaggtctgcgaatcagcctggaatcaataactaccagaaacgcctgatt
catcaacttgttcgttcagaatatccggatctagtctcaattggcagggctatgttcgtc
caaatcgtcaagtacgacaagaaacgtgagctcaatgtacaggaggggcggatgaggcaa
gttcgcgagcgtatctacaaccaaacgggctttcggtggatagtggaggctatgaccggc
ggcgacttatccagactctcctccgactctgttgcggattccagtcgcgaccctcacggt
cgtaagcaaaaagccttcggtcatatcgactatctacaggcgaagctgaagtcaaagcga
ctggttctagttgggcataatatctttactgatttggtaaatttctacaaatgcttcatt
gggggtcttccagataaagtagaggagttcctcggtaatgtccatgaattgtttcccatg
attgtggacacgaaatacctggcaacccatgactgcggatcagcccttccatcttcggcg
ctagaggagcttgatgaatcgttgcgtttcagggagcttcctactttcactactgacgcc
cagcacaccaaatatgtcgacgagaaacctgtccacgaagctggctatgatagtttgatg
acggctcgtgttttcctaagacttgcctcccagcttcacgcgaagggtgttgtcacagag
ggggcctcagaacaagccagttgcgacggagaaggcggtggagtatctttaggcactggt
gacattttggcaaagggtctggatataccatcctcacgctccgttgaagaaacgctggta
atacgcgaacgagaatgttcccagacgccggtcactgttacaagacaacaaccagttatt
gctcacgcaacgaaattcgacattctcgctgatcagccggatgatatatcggaatatttg
ggctcggacgacgattctgttgaagaggattcgttcctcacttcgggaggtgatttaaca
atcgattccaaaattaagcatggcaaattgctaccccgactagacaatgagttttggaag
gtctacggaaataaacttcggatgtttgggattgcagagaggttttgcgagttgaggctt
catgataaataa
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