Coccidioides posadasii: 9693033
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Entry
9693033 CDS
T01332
Symbol
D8B26_000311
Name
(RefSeq) uncharacterized protein
KO
K14327
regulator of nonsense transcripts 2
Organism
cpw
Coccidioides posadasii
Pathway
cpw03013
Nucleocytoplasmic transport
cpw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
9693033 (D8B26_000311)
03015 mRNA surveillance pathway
9693033 (D8B26_000311)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpw03019
]
9693033 (D8B26_000311)
Messenger RNA biogenesis [BR:
cpw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
9693033 (D8B26_000311)
mRNA cycle factors
P-body specific factors
9693033 (D8B26_000311)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
9693033
NCBI-ProteinID:
XP_003067550
UniProt:
C5PBS8
LinkDB
All DBs
Position
1:join(1206518..1206536,1206599..1206643,1206731..1208862,1208912..1209203,1209261..1209418,1209466..1209741,1209796..1210104,1210158..1210299,1210362..1210456)
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AA seq
1155 aa
AA seq
DB search
MDRARKRELRDSNIKAWIGEPDVFLVNKSLDSSLKKNTAFIKRLRTGITASAQPTFLTEI
RTLSLHKYLSEIISAFYEGACKLKSPGEIAAGVEVASALHQRFGPHEFTKQLGWLLGRGM
STPDKAQLKAWTQEVREKEEKERLVRQRVLLRVVSELWLVGLLRTLDDVERPEDLGSKGK
DGTPTAGSKVSDGQLKGKQSHTAPKASQDKDADPFPLEVIKDLLGYDREHQNLPLAVLFA
KNYGWDIMGIKRADDGRKNVDPSGETTVTSKEAPEASGDESMVNIGSADDPPLVSDEKLQ
TRFRNIMIKYLDDVKKHVVRDHKALAALSRRNAEAYVKSGEILEDRQSNFEKQSKAQEKL
VSNTQILCDILGSEMPELAEKEGLDSLSSGTIGLVKTGEYLRGQGEGPGIWEDEEERRFY
ENLVDLKGKVPAVLLEDGKKKKGEADEQAKNKDADLPNGVTSEDKRERPGQPVESTPRET
DDQSTAIVNKTVGAQVDTLLARLPELQHKDAVDQLALEFCFLNSKASRNRLIKAMQDVPK
GRTDLLPLYARLVATLGQYLPDIPQGLISYLDEEFRSLQRRKQKEFLGQVRTSNIRYLAE
LTKFGVVPEHVIFHCFKVSLDDFSRMNIEIIGNLLENCGRYLLRNPETAPRMASFLETLG
RKKAAQHLGQQERMVLENAMYYVDPPPRPAIQQKERTPMELFVRKLVYLDMNKRNYPKIL
KSVRKLHWEEPEVVRILESVFSKPAKVKYGNIHLLALLVSALYRYHQDFVVNIIDNSLER
ITIGLEQNDFKFNQERIADVKYLGELYNYKMVDSPVIFDTLYRIVTFGHEGGTPIPGKIC
PLDLPDDFFRIRLVCTMLDTCGVCFDRGNSKKKLDFFLTFFQYYIHTKDPMPMDIDFLVH
DTYALTRPQWKLATDLEEAARLFSEAVAQNYKVQDGSKAAEPEEDGESSSSEDELEDDAL
GEGEEDQFSSEEAEAAVDNTDQDAEPESEEEEERIIVTRQEEERDPEAEAEFDRAFEKIM
AESLESRKFERKAMFDVPLPMRRTTREPTAAEDRENNAAASNTMAFSLMTKRGNRQQTRT
IDLPSDSSFAIAMRSQQQAEREEQQRIKNLVLNYDLGDDNDLNDGNEKRTSSKPEKASTS
RGFRARKLQLSDVDW
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtgcaaggaagagagagctgcgtgactcaaatataaaggcttggatcggagaa
ccagatgtttttctcgtcaataaatcacttgattcctccttgaagaaaaacactgccttt
atcaaacgtcttcgaaccggaatcaccgcttccgctcaaccaacctttctcacggagatc
cggaccctgtctttacataaatatctctcagaaattatatctgctttctatgagggtgct
tgcaaactcaaatcacctggagaaatagcagcgggggtcgaagttgctagtgcactgcac
cagcgtttcggtcctcatgagttcacaaagcaactcggctggctgctgggccgcggtatg
agcacgccagacaaggcacaactgaaagcttggacgcaagaagtacgagagaaggaagaa
aaggaacgtcttgtacggcaacgtgttttgcttcgtgtcgtatcggagctgtggctggtg
gggcttctgcgcaccctggacgatgtggaacggccagaagatttagggtcgaaggggaag
gatggaacacccacagctggtagcaaagtttccgatggtcagctaaaaggtaaacaatca
catactgcgccgaaggccagccaagacaaagatgcagacccgttccctttggaggttatc
aaggacctactcggctatgatcgtgaacatcagaacttgccccttgctgtcttgttcgct
aaaaactacggttgggatatcatgggcatcaaaagagcagacgatggtaggaaaaacgtc
gatcccagcggtgagacaacagtgactagcaaagaggcccctgaggcctctggcgatgaa
tccatggtcaatattggttcagcggatgacccgcctctggtatccgatgagaaattgcag
acccgattcaggaatatcatgatcaagtacctggatgatgtgaagaagcatgttgttcgt
gatcacaaagctctggctgccttgagccgccgcaacgccgaggcgtatgtgaaaagcgga
gagattctggaagaccgacagtccaactttgagaaacaatccaaggcccaagaaaaactg
gtttcaaacactcaaatactctgcgacattctaggctcggagatgccggaactggctgag
aaggaaggtttagacagcctcagtagtggaaccattgggcttgtgaagactggcgaatat
ctgcgtggacaaggcgaagggccaggaatctgggaagatgaagaagagcgtcgcttctat
gagaaccttgttgatctgaagggtaaggttccggcggtgctgcttgaagatggcaagaaa
aagaaaggcgaggccgatgaacaagcaaaaaataaagatgctgatctgccaaacggggtc
acatccgaagataaaagggagcggccgggacaacctgtcgaaagtactcctcgagagacg
gacgaccagtcaacagctatcgttaacaaaaccgttggtgctcaggttgataccctatta
gcaaggctcccggaactccagcataaagatgccgtcgaccagttggctttggaattttgt
ttcctaaactccaaagcctcgcgaaataggctgataaaggctatgcaagacgtcccaaag
ggccgtacagatctacttcctttgtatgctcgattggtggcaaccttaggccaatatctt
cctgatattccccaaggtttaatttcatatttggacgaggaattccgcagcctccaacgt
cgcaagcagaaagagttcctcggacaagtgcgcacgagtaatattcgatatctcgctgaa
ctcaccaaatttggtgtcgtgcctgaacatgtcatatttcactgctttaaggtcagtctg
gatgacttttcaaggatgaacatcgagataattggcaatttgcttgaaaactgtggtcgg
tatttgctacggaacccggagactgcaccgagaatggcatccttcctcgaaacccttgga
cggaagaaagcagctcagcatttaggacaacaggaacgaatggtacttgaaaatgctatg
tactacgttgaccctcccccaagaccagccatacagcagaaagagcgcactccaatggag
ttattcgtgagaaaacttgtgtatcttgatatgaacaagcgcaattatcccaagattctc
aagtcggttcgaaagctacactgggaggagccggaggttgtccgcatacttgaaagtgta
ttcagcaagcccgccaaagtcaagtacggcaatattcacctattggctttacttgtcagc
gcactctaccgctatcatcaagattttgttgttaacattattgataattctctcgagcgg
atcacaataggcctagaacagaacgatttcaaatttaaccaggagcgcattgccgacgtc
aagtacctcggagagctctacaactataaaatggttgattctcctgtgatatttgatact
ctatatcgtatcgttacttttgggcacgagggtggcacccccattccaggcaaaatctgt
ccccttgatcttcctgacgattttttccgcattcgccttgtttgcacgatgcttgatact
tgtggcgtttgttttgaccgcggtaactccaaaaagaaactggacttcttcttaaccttc
ttccagtattatattcacaccaaggatcctatgccgatggatatagatttcctcgtacac
gacacatatgcccttactcgcccccaatggaagcttgcaaccgacttggaagaggcggct
cgcttattcagtgaagccgtagcgcaaaattacaaagttcaagatggtagcaaggcagcc
gaacctgaagaagacggtgagagctcctcgtcagaagatgagcttgaggacgacgctctt
ggagaaggcgaagaagatcagttttcgagtgaggaggctgaagctgctgttgataacact
gatcaagacgccgagcctgagtccgaggaggaagaagagcgaataatcgtcactcgacag
gaagaggaacgcgatcctgaagcggaagcagaatttgaccgtgcctttgagaagatcatg
gcggaaagcttggaatcgcgtaaattcgaacgcaaagcaatgtttgacgtacccctgcca
atgagacgtacaactcgcgaacctacggcagctgaagatcgcgaaaacaatgcagcagcg
tcaaacacgatggcattctcactcatgaccaaacgaggaaatcgtcagcagacccgaaca
attgatcttccatcggactccagctttgcgattgctatgagatctcagcaacaggccgag
cgcgaggagcagcaacgcattaaaaacttagttctaaactatgaccttggagacgacaat
gacctcaatgatggcaacgagaagcgtacttcttctaaacctgagaaggcgagtactagt
cggggttttcgtgcccgtaaactgcagcttagcgacgtcgattggtag
DBGET
integrated database retrieval system
