Coccidioides posadasii: 9693125
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Entry
9693125 CDS
T01332
Symbol
VAM6_1, D8B26_000196
Name
(RefSeq) Vacuolar morphogenesis protein 6
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
cpw
Coccidioides posadasii
Pathway
cpw04138
Autophagy - yeast
cpw04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
9693125 (VAM6_1)
04148 Efferocytosis
9693125 (VAM6_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpw04131
]
9693125 (VAM6_1)
Membrane trafficking [BR:
cpw04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
9693125 (VAM6_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
zf-Vps39_C
CNH
Clathrin
TPR_Vps41
Tail_completion_gp17
Motif
Other DBs
NCBI-GeneID:
9693125
NCBI-ProteinID:
XP_003067642
UniProt:
C5PC20
LinkDB
All DBs
Position
1:complement(join(802210..802261,802322..802810,802878..802986,803049..803942,803992..805591))
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AA seq
1047 aa
AA seq
DB search
MLSAFTAQPLVELRPRDKSKIESLLAYGDRLLVGLNTGSLRIYRVNEINDDEDGLEDAEN
AGEHVDGGTPSTPVKAKPTDLLREEENFARYKIEQLAIIKEANVLVSLSGGYVSLHDWQT
YQLQEQLVRTKGASTFTVTSNIVKDKSTGVPSIVSRLAVAVKRKVMLWTWRDMELEEDTG
EITLVSGIKTLTWATGTKLLAGLNSSYLLVDIESKKLTDIIGPGSIGGSGGSERGGLGMT
SMSYIGIGGAAPKPLATRLSEGEMLLAKDVNTHFIDTDGNSLGRGQIPWSAAPEAVGYSY
PYLLTLQDPSNGTLEVRNPETLYLLQSISLPSASIMHIPQPNISLAHAGKGFLVAGERII
WRMNALDYDSQIDSLVEEGHFDEAISLLGMLEDALLTDKLGRLREVKLQKAQDLFDNRKY
RASLDLFTEVSAPPELVIRLYPKIIAGDLSTVVEDEYQSESEGNAEESSDRANGSKPNGV
VAIAEDKNKGKGVGYTPSVRSLLKYKTEDGASETSSVWGVSGDKDSNGADKPLQGKDLKA
AVYELQGFLADIRRRLQRFLNPDGSVKVSDLCVNGESDEFSKSVISILGISENDEDVDIG
KRLRETASLVDTTLFRAHMYATPSLAGSLFRIANFCDPDVVMEKLEETGRYNELIDFLFG
KKLHRPALEHLQKFGQAEKEEKSAPQLLGPKRTITYLQNLPSEMVNLILEFAEWPLRTDP
ELGMEIFLADTENAETLPRDKVLDFLQGIDPKLAIRYLEHVIEELNDMTPDLHYRLLLLY
LERLKNGKEGEEAAEFQDEEERGECKGKFLDMLKSSSQYSPAKMLDRLPRDNPEFFEARA
IVFSKMGQHRQALEIYVFRLNHPQKAESYCNQIYLAKDTHANVPDKLHKVSPTDHDENHP
SIYHTLLSLYLSPPHGYKPQYGPAVEILAKHGSRLPASSTLDLIPESFPIHELEFYFRGR
IRAENSVVNESRIVAALRKVQSINSEADLLIGDGLLGGNRGRNRFVTVTEERMCGVCHKR
LGGSVISVFPDNTVVHLGCVNRRSPGV
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgctctccgcatttaccgcccaaccccttgtcgagctccgcccgcgagacaagtcgaag
atcgagtctctcttagcctatggagatcggctacttgtcgggctgaacacgggaagtttg
cggatataccgggtgaacgagatcaacgacgacgaagatggtcttgaagatgctgagaac
gctggcgagcatgtcgacggtgggacgccgtcaacacctgtgaaagcgaaaccgacggac
ttgctgagggaagaagaaaatttcgcgagatacaaaattgaacagttggcgattattaaa
gaggcgaatgtgttggtttcgttgtcgggcggatatgtctctcttcacgactggcagacg
tatcagctgcaggagcagctggtgcggacaaagggcgcctccacgtttactgtgacatcg
aatattgtgaaagacaagagcactggcgttccctcgattgtgtctcggctggccgtggcg
gttaagaggaaggttatgctgtggacgtggcgagatatggagctcgaagaggatactggc
gagattacactagtgagtggaataaagacgctcacttgggcgacgggaacgaagctgtta
gcgggattaaattccagttatctgcttgtggatatcgagtcaaagaaacttacagatatc
atcggaccggggagtattggcggctctggcggttcggaacgcggaggcctcggtatgacc
agtatgagctacatcggcattggaggtgcggcgccaaaaccattggcaacaagactctcc
gaaggcgaaatgctgttggcaaaggatgtcaatactcattttatcgataccgacggcaac
tctcttggccgcggacagatcccatggagcgctgctccagaggctgtcgggtattcttat
ccctatctgcttacactccaagatccttcaaatgggacactagaagtgcgcaaccccgaa
actctatatcttcttcagtcgatctcgctaccgtcagcgagcataatgcatatccctcag
cctaatatcagccttgctcacgccggaaaaggatttcttgttgccggtgagcgcataatt
tggcgaatgaacgccctagattacgattcgcaaattgactcgctcgtcgaagaaggtcat
tttgacgaggctataagcttacttgggatgcttgaagatgctttgttgacggacaaactt
ggccgtttgcgagaagttaaactacaaaaggcccaggacctattcgataaccgaaagtat
cgtgcttctctagacttatttacggaagtgtctgcgccccctgagcttgtcattcgcttg
tatccaaagataattgctggcgatttgtctaccgtggtagaagatgaatatcagtcagaa
tcagagggaaatgccgaggaatcgtcagatagagcaaacggaagtaaacctaatggtgtt
gttgcgatcgcggaagataagaataagggaaaaggcgtcggttacacaccttcagtcagg
tctctgctaaaatataaaactgaagatggtgcaagcgaaactagcagcgtttggggagtg
tccggggataaagatagcaacggagcagacaaacctctgcaagggaaagaccttaaagcg
gccgtatatgaactacaaggatttctcgcggacattcgcaggagacttcagaggttcctc
aacccggatggtagcgtcaaagtatcagacctgtgcgtaaacggcgaatccgatgaattc
agcaaatccgtgataagcattcttggaatctccgaaaacgacgaagatgtggatattggg
aaaagattgagagaaaccgcctctctcgtcgatacaacacttttccgagcacatatgtac
gcgacgccatccctcgcaggctccctcttccgaatagccaatttctgtgatccagacgtg
gttatggaaaagctggaggaaacaggcagatataacgaacttatcgactttctctttggc
aagaagctacaccgtcccgcccttgagcatctccaaaaattcggccaagctgaaaaggaa
gaaaagagcgcaccacagctcctggggcccaaacggacaattacctatttgcagaattta
ccatcagaaatggttaacctgatacttgagtttgcggagtggccgcttcgaactgatcca
gagctcggaatggaaatatttctggcggatacagaaaatgccgagactctaccgagggat
aaggtgttagatttcttacagggcattgatccaaagcttgcaattaggtatcttgagcat
gtcatcgaggagttgaatgatatgacgccagatttgcattatcgactgctactgctatat
ctggagaggttgaagaatgggaaagagggcgaagaagcggcggaatttcaggatgaagag
gagcggggtgaatgcaaagggaagtttctggatatgttgaagtccagctctcagtattcg
ccagcaaagatgcttgaccgacttcctagggataatcccgagttttttgaagctagggca
attgtattcagcaaaatgggtcagcataggcaagccttggaaatttacgttttcagattg
aatcatccacagaaggcagaaagctactgcaatcaaatatacctggctaaagatacccat
gccaacgtcccagataaattgcataaagtttctcccacagatcacgatgaaaaccacccg
tcgatatatcataccctcctctcactctatctatccccgccacatggatataagcctcag
tacgggccggcagtcgaaatccttgccaaacatggctcccgccttcccgcaagctccaca
ttagatttaataccggaaagctttcctattcatgaacttgaattttacttccgtgggaga
atacgcgcggagaattccgtggtgaacgagagcaggattgtcgcggctttgagaaaagtg
caaagtatcaattccgaggctgacctgttaatcggcgatggacttctgggaggaaacaga
gggaggaatcgattcgtaacagtgacagaggagagaatgtgcggtgtctgtcacaagcgg
ttgggtggcagcgtcatcagcgtctttccagacaatacggtcgtacatctcggttgcgtt
aatagacgaagccccggcgtttaa
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