Coccidioides posadasii: 9693261
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Entry
9693261 CDS
T01332
Symbol
PRP24, D8B26_000048
Name
(RefSeq) Splicing factor
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
cpw
Coccidioides posadasii
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpw03041
]
9693261 (PRP24)
03036 Chromosome and associated proteins [BR:
cpw03036
]
9693261 (PRP24)
Spliceosome [BR:
cpw03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
9693261 (PRP24)
Chromosome and associated proteins [BR:
cpw03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
9693261 (PRP24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_PARP14_3
Nup35_RRM_2
HAT_Syf1_CNRKL1_N
Lsm_interact
RRM_Nup35
RBD_DEAH11
DUF7551
HAT_PRP39_C
DUF719
Motif
Other DBs
NCBI-GeneID:
9693261
NCBI-ProteinID:
XP_003067778
UniProt:
C5PCF6
LinkDB
All DBs
Position
1:complement(join(377851..378630,378696..379052,379113..379337,379432..381960))
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AA seq
1296 aa
AA seq
DB search
MDINSLLSHDSTPSSQARNPSANSPRRRPSHNLRSNPARQNMTSSPLVHQVLTPSNLREP
SPPAISPVIGPVRSSGGTPPSSDLPPPRQASTPGMDTLADLASMQQHQPQRSNAPRLRNA
ESYESQLSPSTMYPNVPPVTHTTPTPRPFESNAADGSSDTPRRDYSNTCLAPDARKQATE
LCAEIQRNPHAYDARVKFIKLLHQGFVDHVYPPSSPGSRGDPQKYDVLKDLRAAREELDN
LFAIGEDLWVEWIQDESLLARTVEERISVMELCQRSVEEEFGSTRLWIIYGDWMLYLYNS
ASNSGEPAASQAQWSEEDKVVGREVFGWQSVMDVWRKGAEATRWRISDSHLVWNRYLELA
MRDLASSPTSEKASQVRALFESRLQTPHMAWDQTFQIFSNFVSTYYNANYEDIMVSTNAK
AGEIKAICDARETSELALQRAVESNDTTAEWTAYSQYLELETTHKYKKPLYGFQLITALF
QRALLRFPTDASLWDDYVIYIVNESMHRRTNEPVIPILERAARHCPWSGSLWSQLLLSAE
RAGYSFQDISDLKHRATRTGLLEAAGVDEVLKVHTTWCSYLRRLPFQSNSTDEDLDVAEV
GMRSAIESVQAIGDKGDKTVPNDPLFRLERIYIRYLSESGSWDSARETFKGLVGRHGHTY
EFWLMFYTWELLCWSKFTQGDGPRKAPSPHYATAVLKQALQRDDLDWPEKIMDTYIAHCE
QYEDAEELQLAIVEIRRVSKKVAKRREKEALEAAAQQQAAVAQAVQAVQNNAEDTVHVGK
RKRESADVNGLASKKPKAEVSEAKPAEPEAEHAPKRDRENSSVSVKNLPRDVRTLKIRQF
FRDCGKINAVTLLPADGDSASAIVEFDSKDDAEVAQTRDQKVLEGRVLSVQLETKATLFV
TNFPPEADESYIRRIFSPHGEIVEVRFPSLKFNTHRRFCYVQFASAADAHDALELDHKSV
GENLNLVVKISDPSKRQARSGAFEEGREIHISNLDWKATEDDLIELFTAFGKVEVARIPT
KADGGSKGFGFVAFSTPEAANAALAMDQKEFRSRPLRVRLSTHTGAKRQSTTIISRVGRS
KSPSMEPNGGASPSTASVNQADLPVGERNLRTLGLMNIPDTVNDARIRTLVEPYGPLVKI
ILRPDHQGAIVEFMDVGDAGKAALGLDGQEIAPGRQIRVGPVSEMLKQPPEHKVDRLQVG
KQKQKQKPALMVQPAAPISRPGQQGRAGRRGGLGVKKGAFNGKIGPASIATKAEAQQSSA
DRVSSHDHILSEAPKPKSNDDFRAMLSQPKTKSEEI
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atggatataaattcgctcttgtcccacgactcgacgccctcgagtcaggctcgtaatccc
tcggccaactcgcctcgcagaaggccgtctcacaatcttcgctccaacccagcgaggcag
aacatgacctcttctcccctcgttcaccaggttcttacgccttcgaatctgcgcgaaccg
tccccgcctgccatcagtcctgtaattgggcctgtgcgatccagcggcgggactccacct
tcctccgatttgcctccgcccagacaggcgtcgactccgggaatggataccctcgctgat
ctcgcctcgatgcagcagcatcagccacagcggtctaacgccccgagactgaggaatgcc
gaatcctacgaaagccagctctccccgtcgacgatgtacccaaacgtacctccggttacc
cacaccactccgacgcctcgcccctttgaaagcaatgcggccgatgggtccagtgataca
ccgaggagagattattccaacacctgcctcgccccggatgcccgtaagcaagcgaccgag
ctttgcgccgagatccagcgcaatccccatgcctacgacgcccgcgtcaagttcatcaag
ctgctccaccagggctttgttgaccacgtctatcctccgtcgtcgcctggctctcgcgga
gatccccagaagtacgatgtcctcaaggacctccgcgcggcccgtgaggaattggacaac
ctattcgcgatcggcgaggacctctgggtggaatggatacaggacgagagcctgcttgct
cgcacagtagaggaacgcatctctgtgatggaactgtgtcagagatccgtcgaagaggaa
tttggaagtactagactctggattatctatggggactggatgttatatctctacaattcc
gcttccaattctggagagccggcggcttctcaggcgcaatggtcagaggaggataaggtc
gtgggtcgtgaggtgtttggctggcagtcagttatggatgtgtggaggaaaggcgccgag
gccacgaggtggcgtattagcgacagccacctcgtctggaatcgatatctcgagcttgcc
atgcgagatcttgccagctcacccacctccgaaaaggcatcccaagtccgagccttgttc
gaaagcagactgcagactcctcacatggcctgggaccagacgtttcaaatattttccaat
tttgtttcaacttactacaatgccaactatgaggatatcatggtcagtactaatgcgaaa
gccggcgaaataaaagccatttgtgatgccagagagacaagcgaattggccctgcagcgt
gccgtcgagtcgaatgacactacggctgaatggaccgcatacagccagtatctcgagttg
gaaactacgcacaagtacaagaagcctttgtacggctttcagttgataacggcgttgttc
cagcgtgctctgctgcgattcccgactgatgcgagtctctgggatgactacgtcatatac
atcgtcaatgagtcgatgcatcgccgcaccaatgagcccgtcattcctatcctagagcgt
gctgcaaggcactgtccctggtccggttctctctggtctcaactcttattatccgcggag
cgagccggctattccttccaggacatatccgatttgaaacatagggccacccgtaccgga
ttgctcgaggctgcaggtgtcgatgaggtgttgaaagttcacaccacctggtgcagctac
ctccggcggctgccgtttcagtccaattctacggatgaggatttagacgtggcagaagtg
gggatgcggtccgcgatcgagagtgtccaagctataggcgacaaaggcgacaagacggtc
ccgaacgatcctctcttccgcctcgaacggatatatatccgttatctgagcgaaagcggc
agctgggatagtgccagagaaacattcaagggcctggttgggcgtcatggtcatacctac
gagttttggctcatgttttatacgtgggagctcttgtgctggagtaaatttacacaaggt
gacggtccccggaaagcccccagtcctcactacgcgacggcggtgctgaagcaggcgctg
caaagagatgacttggactggcccgaaaagataatggatacatatatcgcgcattgcgag
cagtacgaagatgccgaggagcttcagctggccatcgtcgagatccgaagggtctccaaa
aaggttgcgaagcgacgagaaaaagaagctttggaggcagcggctcagcagcaagcagcg
gttgctcaggcagtgcaggcagttcagaataacgctgaagacacggtgcatgttggaaag
cgaaaacgtgaatccgcagacgtcaacggcttggctagcaaaaaaccaaaggccgaggtt
agcgaagccaaacctgcggaaccagaggcggagcatgctcccaaacgcgaccgggaaaat
tcgagtgtttcggtcaaaaacctgcctagggatgtccgaaccctcaaaatccggcagttt
ttccgtgattgtgggaaaatcaacgccgtcacactcctcccggcggatggtgattctgcc
tctgcgatcgtcgagttcgactcgaaagatgatgcggaagttgctcagacgcgggatcaa
aaggttttggaagggcgtgtgcttagcgtccaattggaaaccaaagcaacactttttgtt
acaaacttcccacccgaagccgacgagtcctacattcgacggatattcagcccacatggt
gagattgttgaggtgcggttcccgtctctcaagtttaatacccacaggcggttctgttat
gtgcagtttgcttctgcagccgatgcgcatgatgcactcgagttagatcacaagtctgtg
ggggaaaatttgaacctcgtggtgaagatatccgacccctcgaaacgccaagctcgttct
ggtgcgttcgaggaaggccgggaaatccatatctcaaaccttgattggaaggctactgaa
gacgacctaattgagctctttacggcttttggcaaagtcgaagttgcgcgcatcccaacg
aaggccgacggtggcagtaaggggtttgggtttgtagcattttccacaccggaagctgca
aatgctgctttggcgatggatcagaaagagtttcgctcccgaccgctccgtgtcagactg
tctacgcacaccggcgcaaaacgccaatctactaccataatttcgcgcgttgggcggtcc
aagtctccatccatggaaccaaatggaggggcttcgccatccaccgcttcggtcaatcaa
gccgacttaccagttggtgaaaggaaccttcgcactctcggtctaatgaatattcccgac
accgtcaacgatgcccgtattcgcactctagtcgagccgtatggacctcttgtgaagata
attcttcgccctgaccatcaaggtgctattgtcgagttcatggacgtgggtgatgctgga
aaggcggcccttgggctcgacggccaggagattgctccgggtcgtcagattcgcgttgga
ccagtatcagaaatgctgaagcagccgcccgagcataaagtggatcgtcttcaagttgga
aagcaaaagcaaaagcaaaagccggcgctcatggtccagcctgccgcacccatttcgaga
cctggtcaacagggtcgtgcgggaagaagaggcggactaggtgtaaagaaaggcgccttc
aacgggaaaattgggcccgcttcaattgccacgaaagcagaagcacagcagtcttctgca
gatcgagtttcctcccatgatcacatattatccgaggctccgaagccaaagagcaatgac
gatttccgagccatgttaagtcaacccaagactaagtcagaggagatatga
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