Coccidioides posadasii: 9693316
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Entry
9693316 CDS
T01332
Symbol
DBP2_1, D8B26_004224
Name
(RefSeq) ATP-dependent RNA helicase dbp2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cpw
Coccidioides posadasii
Pathway
cpw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
9693316 (DBP2_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpw03041
]
9693316 (DBP2_1)
03009 Ribosome biogenesis [BR:
cpw03009
]
9693316 (DBP2_1)
Enzymes [BR:
cpw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
9693316 (DBP2_1)
Spliceosome [BR:
cpw03041
]
Complex A
U1 snRNP components
U1 related factors
9693316 (DBP2_1)
Complex B
9693316 (DBP2_1)
Ribosome biogenesis [BR:
cpw03009
]
Eukaryotic type
Pre-60S particles
Helicases
9693316 (DBP2_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF2443
Utp25_C
Motif
Other DBs
NCBI-GeneID:
9693316
NCBI-ProteinID:
XP_003067830
UniProt:
C5PAQ1
LinkDB
All DBs
Position
2:join(5504403..5504470,5504587..5504759,5504814..5505782,5505849..5505956,5506422..5506550,5506609..5506799)
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AA seq
545 aa
AA seq
DB search
MSYGGGYSSSRDHYGGGHHSGGSGYRSGGYGGSNGYSHGNSNGYGSYGGNSHGSGVGSHG
GGHHGDRMSNLGSGLKQQEWDLNALPKFEKHFYKEHPNVTNRSAQDVEAFRKEHEMTVYG
KNVPRPVETFDEAGFPQYVISEVKAQGFAKPTPIQSQGWPMALSGRDVVGIAETGSGKTL
TYCLPAIVHINAQPLLGPGDGPIVLVLAPTRELAVQIQAEITKFGKSSRIRNTCVYGGVP
RGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKII
GQIRPDRQTCMWSATWPKEVRQLAHDFLHDYIQVYIGSQDLSANHRITQIVEIVSDFEKR
DRMINHLERIMDDKKSKILIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLNE
FKTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITLFT
TDNAKQARDLVNILTESKQQIDPRLAEMARFGGGGGGGGRWGGRGRGRGGFTASNAAPLG
HNRRW
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacggaggaggttattcctcatctcgcgaccattacggtggcggccatcattct
ggcggaagtggttacagaagcggtggctacggtggaagcaatggatattctcatggtaat
tcgaacggctatggatcctatggtggcaactcccacggtagtggtgtcggctcacatgga
ggcggccatcacggtgaccggatgtccaatctcggttctggtttgaagcaacaagaatgg
gatttgaacgccctgcctaagttcgagaagcacttctacaaggaacaccccaacgtgact
aatcgctccgcacaagacgtggaagctttccgaaaagaacatgaaatgactgtctatgga
aagaatgttcctcgccccgttgaaacatttgacgaagccggcttcccccaatacgtgatc
tctgaagttaaggctcagggattcgctaaacccacacccatccaatctcaaggttggcct
atggccttgtctgggcgcgacgttgttggtattgcagaaaccgggtcgggaaaaactttg
acatattgcttgcctgctatcgtccacatcaatgctcagcctctgctcggccctggcgat
gggccaatcgtacttgttctggcgccaactcgcgagttggccgttcaaatccaagccgaa
attacaaagttcggaaagtcttcacgcattcgaaacacctgcgtctacggaggtgtccca
agaggacctcaaattcgcgatctttcccgcggtgtcgaagtctgtatcgccactcctggt
cgtttgattgatatgcttgaagcgggaaagacaaaccttcgtcgggttacttacctcgtt
ctcgatgaagcagatcgcatgcttgatatgggtttcgagccccaaattcggaagattatc
gggcaaattcgtcctgatagacagacttgcatgtggtcggctacctggccaaaggaagtc
cgacagcttgctcatgactttctccacgattatatccaagtatatattggatcccaagac
ctctccgctaaccataggatcacccaaatcgttgagattgtgtcggatttcgaaaagcgt
gatcgcatgatcaaccatctcgaacgtatcatggatgacaagaagtccaagatcctcatc
ttcactggcacaaaacgtgtggcagatgatattacccgattcctccgtcaagatggatgg
ccagctttgtctatccatggtgataagcaacagaatgagcgtgattgggttctaaatgaa
ttcaaaactggcaaaagcccgatcatggtagccactgacgtggcttcgcgtggtattgat
gtgcgcgacattactcatgtgttgaactatgactatccgaacaattcggaagattatgtt
catcggattggtcgtactggccgtgccggtgctaagggaacggctattacgctgttcacc
actgacaatgctaaacaggctcgtgatttggtcaatattctcaccgagtccaagcagcag
attgatccacgccttgcagagatggcccgctttggcggcggcggtggaggcggcggccgc
tggggtggtcgcggccgtggccgtggaggttttaccgcctcaaatgctgcccctctcggc
cataatcgccgctggtag
DBGET
integrated database retrieval system
