Coccidioides posadasii: 9693648
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Entry
9693648 CDS
T01332
Symbol
RFA1, D8B26_003666
Name
(RefSeq) Replication factor A protein 1
KO
K07466
replication factor A1
Organism
cpw
Coccidioides posadasii
Pathway
cpw03030
DNA replication
cpw03420
Nucleotide excision repair
cpw03430
Mismatch repair
cpw03440
Homologous recombination
cpw03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
9693648 (RFA1)
03420 Nucleotide excision repair
9693648 (RFA1)
03430 Mismatch repair
9693648 (RFA1)
03440 Homologous recombination
9693648 (RFA1)
03460 Fanconi anemia pathway
9693648 (RFA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpw03000
]
9693648 (RFA1)
03032 DNA replication proteins [BR:
cpw03032
]
9693648 (RFA1)
03400 DNA repair and recombination proteins [BR:
cpw03400
]
9693648 (RFA1)
Transcription factors [BR:
cpw03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
9693648 (RFA1)
DNA replication proteins [BR:
cpw03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
9693648 (RFA1)
DNA repair and recombination proteins [BR:
cpw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
9693648 (RFA1)
MMR (mismatch excision repair)
9693648 (RFA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
9693648 (RFA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
CDC24_OB3
DUF223
Motif
Other DBs
NCBI-GeneID:
9693648
NCBI-ProteinID:
XP_065980302
LinkDB
All DBs
Position
2:complement(join(3444584..3444692,3444745..3445643,3445703..3446243,3446308..3446398,3446453..3446604,3446658..3446689))
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AA seq
607 aa
AA seq
DB search
MANNITVGALSAIFDDTKEKVAKPIVQCLHVKLLSSPSGGPDRYRAVFSDISNFVQTMLA
SSLNNLVNNGALRRGCFVQLKSFQANFVKGKRILIVLDLDVLEDLGECERIGDPKPLETK
VAEVEKPTPTAISSDGFYGVVSEHSAAQPQRHQRASVPTMAPTHANIYPIEALSPYSHKW
TIKARCTNKSAIKKWYNRNGEGRLFSVNLLDDSGEIRATAFKEQCDLLYPLFEEGSVYYI
SSPCRVQMAKREFSNVNNDYELTFERDTVIEKAEDHEDVPQMRFNFTSIGHLHSVEKGTT
IDVLGVLKTVEPVAEVPSKSTGKRYTKRELMLVDDTGYSVPLTIWGAMATSFDVMPDSVV
AFKGVKVSDFGGRSLSLLNSGTITSDPDIEEAHKLKGWYDAQGKFDQFATHALSENAAIS
TGTRQDIYKAIVEVRDNQLGMTEKPDYFSLRATVVFIKQDTICYPACVQERCNKKVVQVD
SEQWLCEHCEKSSLRPEYRYILSANVSDHTGQLWLNCFDEVGRAIMGMPANVLMELKESD
DKAASEAILHATCQMWNLKCKAKLDNFQNQPRVRYQVLGASPINFSHESSRLVSLIESYG
IEKSDGE
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataatatcacagttggagcactgagtgccatttttgatgatacgaaggaaaaa
gtggccaaacctattgtgcaatgtctccatgtgaagcttttatcttcaccgtctgggggc
cctgataggtaccgagctgtcttcagtgatatatcaaattttgtacagacaatgctcgca
agttcactgaataatcttgtgaacaatggagcattgcggcggggatgtttcgtgcagtta
aagtctttccaggcaaattttgtgaagggcaaacggatccttatcgttttagaccttgat
gtattagaggacctaggtgaatgcgaaaggattggagacccaaagcctttggagacaaag
gtagccgaagttgagaagccgacgcccacagccatttccagtgatggattctatggtgtg
gtgtcagaacattcagccgcacaaccacaacgccaccagcgagcaagtgttccaacaatg
gcacccactcacgcgaatatttatccaattgaggcactgtcaccttactctcataagtgg
actatcaaggcgcggtgtactaacaaatcagccatcaaaaagtggtacaatagaaacgga
gaaggaagattattcagtgttaacctgttggatgatagcggagaaatccgagctacagcc
tttaaagaacaatgtgacttgctttacccgctctttgaggagggtagtgtgtactatata
tcgagtccttgtcgtgttcaaatggccaaaagggaatttagcaatgtgaacaacgattat
gaacttacttttgaaagggacactgttattgagaaggcagaagaccatgaggatgtccct
caaatgcgctttaattttacgagtattggtcacctacactctgtggaaaagggtacgacg
atcgacgttttgggcgtcttgaaaaccgttgaaccagtcgcagaagttccgtccaaatcc
acgggcaaacgatacacgaagcgtgagcttatgctagttgacgatactgggtattctgtt
cctcttaccatttggggggcaatggcgacttcttttgacgttatgccggattctgtcgtc
gcattcaaaggtgtaaaggtttccgattttgggggaagatctctgagcctattgaactcg
ggaacgatcacgtcggacccggatattgaagaagcccataaattaaagggctggtatgac
gctcagggtaaattcgaccaatttgcaactcatgccttgagcgaaaatgcagcgatttcg
acaggtacccggcaggatatttacaaggcaatcgttgaagttagagacaaccaacttgga
atgactgagaaaccagactatttttctctcagggcaactgtggttttcatcaagcaagat
accatctgttatccggcctgtgttcaagagagatgtaataagaaagtcgttcaggtcgat
tctgaacaatggctctgcgaacattgtgaaaaatcaagtcttcggcctgaataccggtac
attctatctgcaaatgtctccgaccatacagggcaactttggctgaattgctttgatgaa
gttggacgagcaatcatgggcatgccagctaatgttcttatggaacttaaagagagtgat
gataaagctgcaagtgaggccattcttcatgctacctgccagatgtggaatcttaaatgc
aaagccaagttggacaactttcaaaatcagccgcgtgttagatatcaggtcttgggagct
tcaccaatcaatttctcgcatgagtcttcacggcttgtaagtttgattgagtcttatggt
attgagaagtctgatggagaatga
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