Coccidioides posadasii: 9693708
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Entry
9693708 CDS
T01332
Symbol
RIM20, D8B26_003594
Name
(RefSeq) pH-response regulator protein PalA/rim20
KO
K12200
programmed cell death 6-interacting protein
Organism
cpw
Coccidioides posadasii
Pathway
cpw03250
Viral life cycle - HIV-1
cpw03272
Virion - Hepatitis viruses
cpw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
9693708 (RIM20)
03272 Virion - Hepatitis viruses
9693708 (RIM20)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
9693708 (RIM20)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpw04131
]
9693708 (RIM20)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpw04147
]
9693708 (RIM20)
Membrane trafficking [BR:
cpw04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
9693708 (RIM20)
Exosome [BR:
cpw04147
]
Exosomal proteins
Proteins found in most exosomes
9693708 (RIM20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-GeneID:
9693708
NCBI-ProteinID:
XP_065980278
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All DBs
Position
2:complement(join(3249394..3249850,3249921..3250323,3250387..3251845,3252095..3252332,3252461..3252468))
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AA seq
854 aa
AA seq
DB search
MASNMLKIPFRRSHPVSLSDSLAQYISSKYDQHPDMFSEDLLVISRLRTDAINVQEPHIS
GISRLVTYAAQLKWIGGKFPIDNNVRYELVNILFNLAALLSQLAVSLHPSDPNNLKIACK
YFCQSAGVILHLRTDILPDLRSSPPEDMDEMTLRSLEELMLAQAQECFWQRAIKDGLKDA
SIARLAAKVSDFYANSGDFAVKSNAISTAWIHHMTAKHHHFAAAAQYRQSLDCLEKRKYG
EEVARMRDSLTCANEALKEAKWINKAVLGDLNTLKARVSEDLKRAEKDNDMIYLKPVPPK
SELKLLDRATMVAAEAPKEVIEALSMIGEGAPLGRPLFAKLVPYAVHVAASIYVDRRDQL
VNQTIGELESMTLRLRDLLQSLNLPGSLQALEKPLGLPPSLVSHAEEIRQQDGLNRLYRS
LEDTSKLKANDKAIYTEGVELLMAEKEEDNRARTKYGTDRWTRLPSEQAAEKLYTKVHEF
DGYLASADKSDSLVYKKLRESEHVLRVLTATNRELEAYVPSSRKATVTPQVERELNRLRG
SLNDVTRLENRRKRKIEALREKAKADKIHSALVKETSRLEREYPMQTIEPGQFEDLFEEH
LRLYDSDRDMLNEEQKNQTQIENQIREANKAFIMARKGDSSTKEREKALQDLENGYIKYN
EIISNIEGGRKFYNDLAKLVGRFREECKKFVQQRRMEASQMETDITNTTAMASLNITQAS
PPIQPQPPSPTAPQSKNAVPFSLPRQENNPPFTAPQPTRALAQAQLPTFPPPQTPASAGT
GTSPAFPTLPSAAMSRMWSPEMGIRFGTPTQMSLNSRMSGPGSSANATAGGGGAADERRV
SPGKWDPNRGLRFS
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaatatgctcaaaatcccctttcggcggtcccaccctgtctccctctccgac
tctcttgcgcaatacatctcttccaaatatgaccagcacccagacatgttttccgaggac
ctcctggtcatcagccgtttgcgcaccgatgccataaatgtacaggaaccccatattagc
gggatcagcaggctggtcacgtacgcggcgcagttgaaatggattgggggtaaatttcca
atcgacaataatgtacgatatgagttggtcaacattcttttcaacctcgctgcactgctg
tcccagcttgccgtttcactacacccgtcagatccgaataacctaaaaatagcatgcaag
tatttttgccagtcagccggtgttatcttacacctacgtaccgatattttacctgatctt
agaagctcgccgccggaagatatggatgaaatgacattgcgaagtttagaagaattgatg
cttgcacaggcccaagaatgcttttggcaaagggccataaaagacggcctgaaagatgct
tcaatcgcccggcttgcggccaaagtatcagatttttatgccaattcaggtgattttgct
gtgaaatcaaacgctataagcactgcatggattcatcatatgaccgctaagcaccaccat
tttgccgcagctgctcagtatagacaatctttggattgcttagagaaaagaaaatatggt
gaggaagttgctcggatgagggacagtctcacatgtgccaatgaagcactgaaagaggct
aagtggattaataaggccgtccttggtgacctgaatacactcaaagcccgggtgagtgag
gatttgaagcgggccgagaaggataatgacatgatatacctaaaaccggtgcctccaaaa
tcagaattgaaactacttgatcgggctacaatggttgctgccgaagctcccaaggaagtc
atagaagcattgtctatgatcggtgaaggagcgccacttggtcggcccttgtttgctaag
ttggtgccatatgcagtgcatgttgctgcaagcatatatgtcgatcgtcgagatcaactt
gttaatcagacgataggggagttggagtcaatgacactgaggctccgggatctgcttcaa
tcattgaatcttccaggatctttgcaggcgctcgagaaaccgcttggtttacccccatcc
ctagtatcacacgcggaagagattcgacagcaagacggcttgaaccgtctctatcgctcc
ttagaggatacctccaagctcaaggctaacgataaggctatttacacagaaggagttgaa
cttttgatggcagaaaaggaagaggataacagggcgcgaacgaaatacggcacggatcga
tggacgaggcttccttcggagcaggcggcagagaagctttacactaaggttcacgagttt
gatggctacttggcgtctgcagacaagagtgacagtctagtttataagaagctacgggaa
tcggagcatgttcttcgtgtattaacggcaacgaatagagagttggaagcgtatgttccg
agcagcagaaaagccacagtcaccccacaagtagagcgagaattaaatcggctaagaggt
tcattaaatgacgtgacgagattggagaatcgacgcaagcgcaagattgaagcattgaga
gagaaggcgaaggctgataaaatccattcagcgcttgttaaggaaacttcccgtctcgaa
cgggagtatccaatgcagactattgagccaggccagtttgaagacctcttcgaggagcat
ctgcgtctatatgacagtgaccgtgatatgctcaacgaagaacagaagaaccaaacccag
atcgaaaaccagattcgagaagccaacaaagcgttcataatggcgagaaaaggtgactca
tctactaaagaacgcgagaaagctttgcaggacttggaaaatggctatatcaagtataac
gagattatatccaacatcgaagggggaaggaaattttacaatgatttggcgaaattggtt
ggccggtttagggaagagtgcaagaagtttgtacagcagagacggatggaagccagccag
atggagactgacattaccaacaccactgctatggcttccttgaacataacccaagccagc
ccacccatccaaccgcagcctccgtcaccgacagcgccgcagtctaagaacgccgtacct
ttctccctgccaaggcaagagaataatccacccttcacagcaccacagcctacacgcgct
ctggcccaagcacagctacctaccttccctccgcctcaaactccagcctcagcaggaaca
ggcacatcacctgcatttccgacgcttccctctgccgcaatgtcaagaatgtggtctccc
gaaatggggatcagatttggtacgcccacacaaatgagcttgaactcgcgaatgtccggt
cctggctcctccgccaatgcgactgctggtggtggcggcgctgctgacgagcgccgggtg
tctcccggaaaatgggatcccaatcgtggattgaggttctcgtag
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