Coccidioides posadasii: 9693960
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Entry
9693960 CDS
T01332
Symbol
VPS41, D8B26_003305
Name
(RefSeq) Vacuolar protein sorting-associated protein 41
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
cpw
Coccidioides posadasii
Pathway
cpw04138
Autophagy - yeast
cpw04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
9693960 (VPS41)
04148 Efferocytosis
9693960 (VPS41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpw04131
]
9693960 (VPS41)
Membrane trafficking [BR:
cpw04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
9693960 (VPS41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
Clathrin
zf_RING_Vps8
Beta-prop_EML_2
WD40_CDC20-Fz
BUD22
PQQ_3
zf-RING_5
zf-RING_Vps41
Beta-prop_EML
Beta-prop_LRRK2
TPR_PEP5_VPS11
Motif
Other DBs
NCBI-GeneID:
9693960
NCBI-ProteinID:
XP_003068477
UniProt:
C5P9C0
LinkDB
All DBs
Position
2:complement(join(2393595..2393848,2393911..2396174,2396246..2397168,2397244..2397270,2397326..2397622))
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AA seq
1254 aa
AA seq
DB search
MADDAILPEAGDSKSASSPSSSARERQAEQDNNHRSEEEYDDDDDEEEEEEEEEDEEESD
GEDEDEEPRLKYVSFTKSIGPVYRNGDATSSFLVGGDKMIVGTHNGNILVFDASTFQRFR
VYHAHSASVTSVSMSPFPPPLPSNTGGKNAPLADSSSRASVDLSKSPGQSRQTTVPHSPS
NAIYIATSSIDGNVCVSSLLDPKDVLLRNFGRPVQAVALSPDYKSDKTYLSGGLAGDLVL
TVGGRVGTSSNSTTMAGATASPSGWFGALGFGGNNGKDTVLHSGEGSISAIKWSLSGKYI
VWVNEEGIKIMRSHLHLDNADSDFAWKRMNHVDRPRGPQWDEMAGVWKPRAEWIDEDTYP
GGPGTGEAHTGQLKLDHRERLVVGWGGTIWVINVFPPGRDKDPRKNVIGSAEVVAILRTD
CIVSGVSLYNPNVLLVLSYVASEDDGKSKRKQVGPTRGVRHRQNGLEPEIRLIDVETKEE
LSVDTLTMRRYESLSASDYHLGALPPAKILDTPIRRGTFETIGTGILDATLYPTRLFSSA
SSVRSVTSSGDRRSSLTSSLADAPVADHDSKELAILASEGIKIFIHSPYDCVVAVKRDVK
DRLSWLKDHEKYEEAWELLQQHPEAVAQDIDEGESPLSTPKQRRGSVIGLFSEPVDRADN
IKLEKERQNVGESWLEQLISNNNWEKAGEVCGKVLTTTPKWEHWIWIFAKNNKFDEIVSH
VPLDIHPPLPGLVYEVILGHYVSRNHMKFKELLDLWPPNLFDIDSVIAAINEQIKSSIAA
EEADESRLLTECLAQLFLAGGHYREALRCYIRLQDAETAMSLIREHHLLDAVADDVPGLI
LIRVSKDQIKSASISELEAATSEPIKLLVREAVNGIVHPATVISQLQAADLHLFLYFYVR
ALWKGDFLSTTTDKGTTPIRGHHRTSAADKLVADEGRLLIDAFADTVVELFADYDRPLLM
DFLQSNTSYSYNAACATCELRHFTPELIYLFSKTGQTKRALHLILSDLRDVSHAISFAKS
QDDPDLWEDLLSYSMDKPEYIRCLLVEAGTAIDPITLVKRIPSGLEIQGLREGLTRMIRE
HDIQASISQGVAKVLAGEVSMRMDTLRKGQRRGIKFDIVPNEEAKPTSAVSQHNEPKEEL
DAKGNVESSEKKQTFEPGRCAGCHSKFIEQEKEPLVGFACGHVYHLSHLHLTPRGHSSGE
GNSQLEPPQSTLYEDSSPLLSRTVGLKVTNARLLREKIGDGCQICASKRVTQGQ
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgacgcgatcctacccgaagctggggactcaaagtcagcttccagtcccagt
tcgtccgccagggaaagacaagcggagcaagataacaaccatcggagcgaagaagaatat
gatgacgatgacgacgaagaagaggaggaggaggaggaggaggatgaggaggagtcagac
ggcgaggatgaagatgaagagccacgacttaaatatgtctccttcaccaaaagcataggc
ccagtgtaccgcaatggcgatgcgacaagcagctttctcgttggtggggataaaatgatt
gttggcactcataatgggaatattcttgtcttcgacgcttcgaccttccagcgctttcga
gtgtatcatgcccattcagccagcgtgacctccgtatcgatgtctcctttcccaccacct
ctgccttccaacacgggtggaaagaacgcacccctggcggattcatcaagccgcgcatcg
gtggacctgtcgaagtctcctggacaatcgcgacaaacgacagtaccccattctccttca
aacgcgatatacatagccacatcttccatcgatgggaatgtatgtgtctcgtcgctgtta
gaccccaaagatgtactccttcggaactttggtcgccctgtccaagccgtcgccctgtcc
ccggattataaaagcgacaaaacttatttatccggaggacttgctggcgatttagtcctt
acggtcggtggacgtgttggaacaagttcaaattcaaccacgatggccggtgctactgcg
agcccgtccggttggttcggagcgttaggcttcggtgggaataacggtaaggacactgtc
ctgcactctggcgaagggagtataagcgccatcaagtggtcattgtcggggaagtatatc
gtctgggttaatgaggaagggatcaaaattatgcggtctcacctacacttggataacgcc
gactcggacttcgcgtggaaacggatgaaccatgttgaccgtcctcgcggcccacagtgg
gacgaaatggcgggtgtatggaagcccagagccgaatggatagatgaagatacctacccg
ggtgggccaggtacaggtgaggcgcatactgggcagctaaagcttgaccatcgagaaaga
ttggtggtgggctggggaggaaccatctgggtgatcaacgttttccccccagggcgcgat
aaagatccccgaaagaatgtaatcggttccgcagaggttgtcgcaatattacgcacagac
tgcattgtgtccggagtttcgctttataaccccaatgtgctgcttgtcctatcatatgtt
gcatccgaagacgatggcaagtcaaaacggaagcaggttgggcccactcgtggcgttaga
catcgacaaaacggcctcgagccagagataaggctcattgacgtcgagaccaaagaggaa
cttagcgtcgacacgcttaccatgcgccgctacgagagtctttcggcgtccgattatcac
cttggggctctgccaccggccaaaattctcgatacccccatacgccgaggaacgtttgaa
acaatcggaacgggtatactggatgctaccctgtatccgactcgcctttttagttccgca
agtagtgttcggagcgtgacaagtagtggggatagaagatcgagcctgacgtcaagcttg
gccgatgctccggttgccgatcacgatagtaaagaacttgcgatcctggctagcgaagga
atcaaaattttcattcacagcccatacgactgtgtggttgccgtgaaaagagatgttaaa
gaccgtctttcctggttgaaggatcatgagaaatatgaagaagcctgggaacttcttcag
caacatccagaagccgtagctcaagatattgacgaaggtgaaagccccttgagtactccc
aaacaacgtcgagggagcgttattgggctattttcagagccagtcgaccgagcagacaac
ataaagctggagaaagagcgacaaaatgttggtgagtcgtggctggagcagcttattagc
aacaacaactgggagaaagctggcgaggtgtgtggtaaggtgctcaccacaacgccaaaa
tgggagcactggatctggatattcgcgaaaaacaacaagtttgacgagattgtatctcat
gttcccctcgatattcaccctccattgcctggcctagtttacgaagtgatccttgggcat
tacgtctcacgaaatcatatgaaattcaaggagttgcttgacctctggccgcccaacctt
tttgacattgatagcgtcatagctgccatcaatgaacagataaagtcttcaattgcagcg
gaggaagcagatgagagccgccttttaacagaatgccttgcacagctgttcttggccgga
ggacactatcgtgaagcattacgatgctatattcgacttcaggacgcagaaactgccatg
tctcttatacgagagcaccatttgcttgatgcagtcgcagacgatgtgccgggtcttatt
ctcattcgagtgtcaaaggatcaaattaaaagtgcatccatttccgagctcgaagcagcc
acatctgaacctatcaaactcctcgtacgcgaggcggttaatggaattgtacatccagcc
accgttatctcccagctccaagcggcagatttgcatcttttcctgtacttttatgttcgc
gccctttggaagggggattttctctcaacgaccaccgataaggggacaaccccaatacga
gggcatcatcgaacaagcgctgcggataagcttgtcgctgatgaagggaggctattgatc
gatgcctttgcggatacggtggtcgagctattcgcagactatgatcggcccttacttatg
gactttttgcagtccaacacgtcatattcgtacaatgcagcgtgcgcaacttgtgagctt
cgtcacttcaccccggaacttatctacctcttctccaaaaccggtcagaccaaacgagcc
cttcacttgattctatcagacttaagagacgtctcgcatgctatatcctttgccaaatcc
caagatgaccccgatctctgggaagaccttctttcgtattccatggataaaccagaatat
attcgatgtttgcttgttgaagcaggaacagcaatcgatccgatcacgttggtgaagcga
atcccgagtggattggagatccaaggattgagagagggtctgacaaggatgattcgcgaa
catgatatccaagctagcatcagtcaaggcgttgccaaagtccttgcgggtgaagtttcg
atgcgaatggacacccttcggaagggacaacggcgaggcatcaaatttgacatcgtaccc
aacgaagaagccaaacctacgagtgcagtgtcgcaacataatgagccaaaagaagaacta
gatgcaaaaggaaacgtggaatcatcggagaagaaacaaacctttgagccaggccgctgc
gctggctgtcattccaaattcatagaacaagaaaaagagccgctggtcggcttcgcttgt
ggacatgtctatcatctgtctcatctccacctgactccacggggccattcatctggcgaa
ggaaattcgcagttggaacccccacaatcaacgctgtacgaagactcgtcacctcttttg
tcgcgtactgttggtctcaaagtcacaaatgctagactgttacgtgagaaaatcggcgat
ggatgtcagatctgtgcgtcgaaaagagtgacccaaggccagtaa
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