Coccidioides posadasii: 9693976
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Entry
9693976 CDS
T01332
Symbol
RNA14, D8B26_003289
Name
(RefSeq) mRNA 3'-end-processing protein rna14
KO
K14408
cleavage stimulation factor subunit 3
Organism
cpw
Coccidioides posadasii
Pathway
cpw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
9693976 (RNA14)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpw03019
]
9693976 (RNA14)
Messenger RNA biogenesis [BR:
cpw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
9693976 (RNA14)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
HAT
Response_reg_2
Motif
Other DBs
NCBI-GeneID:
9693976
NCBI-ProteinID:
XP_003068493
UniProt:
C5P9D6
LinkDB
All DBs
Position
2:join(2315188..2316090,2316148..2316579,2316649..2317657,2317716..2318419)
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AA seq
1015 aa
AA seq
DB search
MAEDEAERAFFRSQALNMENYETGDDQGANGSDTDEYDPSKTVEDEFSTGLANPQTTMPS
YSRVSEYSAPDSVQRGDVSHDFSQVQDPGGAFPSKSPSRSESRTSASAYPSGLAVDANSQ
ATAGDVQEEEVGDGDGGDAEYEPPGALDHVQDTTSTPADIQQRSFSQNSNEIVSPFHVSQ
QQTVSEKTTPHDVSNNLSSTAIPTGAPVQSDTASKPDEAALAVPSIAQSTNSSIAATPIP
TPVSKGRLPHDRVGILEDRIQADPRGDTEAWLELISEHRSRNKLDSARQVYERFFKVFPW
AAEQWVAYASMESEHNELYRLEQIFNKSLLNIPSVQLWSVYLDYVRRRNNLTTDTTGQAR
RIISSAYDFALQNIGIDKDSGPVWVDYIQFIRSGPGNIGGSGWQDQQKMDLLRKSYQRAI
CVPMQAVNTLWKEYDQFEMGLNKLTGRKFLQERSPSYMTARSSYTELQNITRDLVRASLA
KLPPAPGFAGHAEYMKQVGIWKRWIKWEKDDPLVLKEEDAGAYKSRVLYVYKQALMALRF
MPDLWFEAADFCFQNGMDAEGTDMLKQGIEANPESCLLAFKRGDQLEITTASEQDRSKRG
TLVREPYDKLLDALYDLITKAKVKEAQDIAQIEEKFAEEGMQPTGRDNDEEEEEDESHES
KAKTAAKAAEIETAKKTHGEHIRLLSKTISYAWIALMRAMRRIQGKGKPGEIAGSRQIFA
DARKRGRITSDVYIASALIEYHCYKDPAATKIFERGAKLFPEDENFALEYLKHLIDINDV
TNARAVFETTVRRLASNPENVAKAKPIFAFLHEYESRYGDLTQIISLEKRMRELFPEDPT
LQQFSHRYSGPLFDPTSAQFIISPTQTRLKQDVPLEEFHSRQESPAGPVYLSPKRAFPVD
DLDDDFRPRKFMRAESPLKGAAGRRLDQKRGHQANGSGANNVGQARAPAQAQPLPRDIVY
LLSIIPPASTYDSVRFIPENMVNLLRQVDIPSSVSQLRPPIHNPTGAGRPQYGGR
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagacgaagctgagcgtgccttttttcgatctcaagcattgaatatggaaaac
tatgaaactggtgacgatcagggggcaaacggttcagacacagatgaatatgacccttca
aagacagtggaagacgagttttctacaggcttagccaatccccaaactaccatgccaagt
tattctcgtgtttctgagtattctgctcccgattctgtgcagcgcggggatgtctcccat
gatttctctcaggttcaagatccaggtggcgcattcccttcaaaatcgccttccagatcc
gaatccagaacctcagcttcggcatacccttccggtcttgctgtggatgcgaacagtcaa
gcgacagctggggatgttcaagaagaggaagttggtgatggagacggaggtgatgctgaa
tatgaaccaccaggagcattagatcatgttcaggatacgacatcaactcctgcagatata
caacagcgttctttttctcagaattctaatgaaattgtttctccatttcatgtatcgcag
caacagactgtctcagaaaaaaccactcctcatgatgtttccaataacttgtcttctact
gctattccgactggtgctccagttcagagtgataccgcttctaagcctgacgaggcagct
ctggcggttccgtctattgctcaatcaaccaacagctctatcgctgccactcccattcca
acaccggtgtcaaaaggccgtttgccgcatgaccgagtcggaattttggaggatagaatc
caagccgatccccgtggcgatacagaagcatggttagagctaatcagcgaacatcgcagt
cggaacaaactcgacagcgcacgtcaagtctatgagaggtttttcaaagtgtttccatgg
gcagccgagcaatgggtagcatatgctagtatggagtccgaacataatgaactttaccgt
ttggaacagattttcaacaaaagtcttttaaatattcccagtgtccagctgtggtccgtt
tatctcgactatgttcgacggcgtaataatctcacaacggatacgactggtcaagcacgg
cgtattatttcctcagcttacgattttgcgttgcaaaatattggaattgataaggattca
gggccagtttgggtggattacattcaatttatcaggtccggacccggaaacatcggtggg
tctggctggcaggatcaacaaaagatggatttactcagaaaatcatatcagcgagccata
tgtgtcccaatgcaagcagtcaataccctttggaaagagtatgatcaatttgagatgggt
ctcaacaaattaacgggtcgtaaatttttgcaagagagatccccgtcgtacatgacagca
cgaagctcgtatactgaattgcaaaatattactcgggatttggtccgagcctcgctggcc
aagttgccccctgctcctggatttgccggtcatgcagagtatatgaaacaggttggaatc
tggaaacgctggattaaatgggagaaagacgacccgctggtacttaaggaagaagacgcc
ggagcatataaatcccgtgtactatatgtttacaaacaggcgcttatggcgctaaggttc
atgcctgacttgtggtttgaggcagcagacttttgcttccaaaacggtatggatgccgag
ggaaccgatatgctaaagcaaggaattgaagcaaatcctgagagctgcctgcttgcattc
aagcgtggtgatcagcttgaaattacaactgcttccgaacaagatcgttcaaaacgcggc
acactggttagggagccatacgacaagctccttgatgccctctatgacctaatcacgaaa
gcgaaagtgaaggaggcacaggatattgcacagatcgaagaaaaatttgcagaagaaggc
atgcagcccactggtcgagacaacgatgaagaagaagaagaagacgaaagtcatgaatcg
aaggcaaagactgctgcaaaagctgctgaaatcgaaacggcgaagaagacccatggcgaa
catatccggctgctctcgaaaacgatatcatatgcctggattgcactcatgcgggccatg
cgtcgtatccagggcaaaggcaagccgggtgaaattgctgggtctcgacagatctttgcc
gatgcacgcaaacgtgggcgaatcacaagtgatgtgtatatcgccagtgcactcatagaa
tatcactgctacaaagacccggcggcaacaaagatttttgagcgaggagcaaaactcttc
cccgaggacgagaatttcgcgctggaatatctaaagcacctcatcgatataaatgacgtt
accaatgcaagagcggtcttcgagaccacagtccgcagactagcgtcaaaccctgaaaac
gttgccaaagcaaaacccatttttgcatttctccatgaatatgaatcccgttacggtgat
ctcacacaaattatcagtttggagaagagaatgagagagctattccctgaagaccctact
ttgcaacagttttctcatcgttattcgggaccgttatttgaccctacttccgctcagttc
atcatctcccccacacaaacgagactaaaacaggacgttccgctcgaggaattccattct
cgtcaggagtcacctgcaggccccgtatacctgtctcccaaacgtgcgttcccagtggac
gacctcgatgacgacttccgacctcgaaagttcatgagagcagagtcgccattgaaaggt
gccgcgggtagacggttggatcagaaacgaggacaccaagccaacggtagcggcgcaaac
aacgtcggccaggcacgagcgccagcacaagcacaaccgcttccaagggacatcgtctac
ctgctcagtattatccctccggcgtcgacctatgattcagtgaggtttataccggagaat
atggtaaatttgcttaggcaggttgatatcccatcttcagtttcacagttacgaccacct
attcacaatccgacgggtgctggacgtcctcaatacggtggtaggtag
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integrated database retrieval system
