Coccidioides posadasii: 9694188
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Entry
9694188 CDS
T01332
Symbol
SOF1, D8B26_003051
Name
(RefSeq) rRNA-processing protein sof1
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
cpw
Coccidioides posadasii
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpw03009
]
9694188 (SOF1)
04121 Ubiquitin system [BR:
cpw04121
]
9694188 (SOF1)
Ribosome biogenesis [BR:
cpw03009
]
Eukaryotic type
90S particles
Other 90S particles
9694188 (SOF1)
Ubiquitin system [BR:
cpw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
9694188 (SOF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Sof1
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
EIF3I
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
NBCH_WD40
WD_LRWD1
PEP5_VPS11_N
eIF2A
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
9694188
NCBI-ProteinID:
XP_065980104
LinkDB
All DBs
Position
2:complement(join(1636851..1637211,1637279..1638258,1638315..1638317))
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AA seq
447 aa
AA seq
DB search
MKIKALSRSAASQQTPGTGATRLARNLDPAQHPFERAREYTRALNATKLERMFAAPFIAQ
LGGGHVDGVYSLAKDPSSLERFASGSGDGVVKVWDLTSREEIWQAQAHENIVKGMCWTSD
RKLLSCAADKTIKLFDPYNSASESPPLATYLGHGAFTAVSHHETHPSFAASSSVISIYDL
SRPSSTPSQTLHWPTSVDTITSLAFNRTETSLLASTATDRSIIMYDLRTSSPLTKVVLTL
ASNAIAWNPMEAFNFAVANEDHNAYIFDMRKMDRALNVLKDHVAAVMDVEFSPTGEELVT
ASYDRTVRLWNRSRGHSRDIYHTKRMQRVFSAKFTPDNKYILSGSDDGNIRLWRAEASSR
SGIKSARERQKLQYDEALKRRYAHMPEIRRIKRHRRLPKAVKKAGEIKNEEINAIKRREE
NIRKNSKKGSLPARRSEREKMVLATEK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaaggctctgtcacggtctgctgcgtcgcagcagacgcccggaacaggagct
actaggctcgctcgcaacctcgatccggcacagcatccattcgaaagagcaagagaatac
acaagagctctcaatgctaccaaactagagcgcatgtttgccgctccttttattgcccag
cttggagggggccatgttgatggtgtatattctttggcgaaagacccaagttccttagaa
cgctttgcaagcggaagtggtgacggcgtggtaaaagtatgggacttgacgagccgcgag
gagatttggcaggctcaggctcatgagaacattgtcaaaggaatgtgctggacatcggat
aggaagctactatcatgcgccgccgataaaaccatcaagctatttgacccttataattcg
gcctctgagagtcctccgttggcgacgtacctggggcacggagcttttactgccgtttcc
catcacgaaactcatccctcattcgctgcttcgtcgtcagtgatatctatatatgacctc
tctcggccgtcttctacgccatctcaaacgcttcactggcccacaagtgttgatactatc
acttcactcgcatttaaccggacggaaacttctctcctagcatcgacagctaccgaccga
tctataataatgtacgatctacgaacatcctctcctcttacgaaggtcgttcttactttg
gcttcaaatgctatcgcttggaatccaatggaagcgtttaatttcgctgtggctaacgag
gatcataacgcctatatctttgacatgcggaagatggaccgtgctttgaatgttcttaag
gaccatgtcgcagctgtgatggatgttgagtttagtccaacaggcgaggaacttgtcacc
gcgtcctatgaccgtacggttcgactatggaatcgttctcgcggacattctcgggatata
taccatacaaaacgaatgcagagggttttctcggccaaattcactccggataacaaatac
attctttctgggtctgatgatggtaatattcgcctctggcgcgcagaagcatcgtcccgg
agtggaatcaaaagcgctcgtgagcgtcaaaaactccaatatgacgaggctcttaagcgt
agatatgcacatatgcctgagattcgtcgtatcaaacgtcatagacgtctgccaaaggct
gtcaagaaagctggcgagatcaaaaatgaggaaattaacgctatcaagagaagggaggag
aatattaggaagaacagcaaaaagggttcgctacctgcccggcggagtgagagagagaag
atggtcctggctacggaaaaatga
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