Coccidioides posadasii: 9694203
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Entry
9694203 CDS
T01332
Symbol
SPB4, D8B26_003035
Name
(RefSeq) ATP-dependent rRNA helicase spb4
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
cpw
Coccidioides posadasii
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpw03009
]
9694203 (SPB4)
Enzymes [BR:
cpw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
9694203 (SPB4)
Ribosome biogenesis [BR:
cpw03009
]
Eukaryotic type
Pre-60S particles
Helicases
9694203 (SPB4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
DUF3106
Motif
Other DBs
NCBI-GeneID:
9694203
NCBI-ProteinID:
XP_003068720
UniProt:
C5PA13
LinkDB
All DBs
Position
2:join(1596546..1596844,1596916..1597440,1597496..1598633)
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AA seq
653 aa
AA seq
DB search
MASKKKERGPPPHSRSWQALTPPLSEWILDAVAAMGFTRMTPVQASTIPLFMGHKDVVVE
AVTGSGKTMAFLIPVVEKLLRLEAPIKKHHVGAIIVSPTRELAEQIYKVLLSLLAFHAPS
AAAIQPSTSDETADGETILPSYPSSTLKVVPQLLLGGATTPAQDLSTFLKRSPNLFVSTP
GRLLELLSSPHVHCPQTSFEVLVLDEADRLLDLGFKDDLQKILARLPKQRRTGLFSATVS
DAVDQIIRVGLRNPVKIAVKVKGAPGTEEKRTPASLQMTYLLTRPSHKIPAIRQILNSID
NTPQKTILYFSTCAAVDYWSHVLPSLLPEIFVTLPLHGKHPPNVRQKNFSRFTNSVSPSV
LLTTDVAARGLDIPLVDLVIQFDPPTDPKAYLHRCGRAGRAGRRGLSVILLCPGREEDYI
PFLEVRKTPVSLLESPPVALSDTLATEATSKIRETVLRDRALHDKAQKAFVSWVRSYTKH
QASSIFRITDIDWEEAGRAWGLLKLPKMPELQKFSGDRTLGVTLDWDKYSYKDKQREKHR
QESLNAATTHNPLKRPAPSSSSNNDTAPWSKTLEKKSDKEKRRERKRAKKEREHWEKMTE
EEKTKSRETRQMLEELRKKNRQELNAKSHTSSSVLSKPQEAELDGESEFEGFD
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaaaaagaaggagcgagggcctccgccgcattcccgctcttggcaggccctg
acgccgccgctgtcggaatggatcctcgacgccgttgcggcgatgggcttcacccgcatg
actcccgtccaggcgtcgacaatcccgctcttcatgggccacaaggatgtcgtcgtggag
gccgtgactggcagcgggaagaccatggcgtttttgatccccgtcgtcgagaagctccta
cgcctggaagctccgataaaaaagcaccacgtcggagctatcattgtctcgccaactaga
gagttagctgagcagatatataaagtccttctttccctcctcgcgttccacgcgccctcc
gctgcggccatacagccttcaacctccgatgagacggcagatggcgaaaccatccttccc
tcctatccctcctcgacactgaaagtagttccgcagctactccttggcggtgcaaccact
cccgctcaggatctaagtacatttttgaaacgctcgccgaacctctttgtctccactcct
ggcaggctcctcgaactcctttcctccccgcatgtacattgtcctcagacttcttttgaa
gttctcgtcctagatgaagccgacaggctactggatctagggttcaaggatgacctgcaa
aaaatacttgcccggctgccgaaacaaaggcgaaccggtttgttcagtgccaccgtgagc
gacgccgtagatcagatcatccgagttggtttgcggaatcccgtgaaaattgctgttaaa
gtaaaaggggcacctggcacagaagagaagcgtaccccggcaagtttgcagatgacatat
ctcctgacacgcccctctcataaaatccccgccatcaggcagatcctcaactcgatagat
aatacaccacagaaaactattctatacttttcgacatgtgctgcagtagactactggagc
cacgtcctaccctccctactccccgaaatattcgtcaccctaccccttcatggaaagcac
ccacctaatgtccgacaaaagaacttcagccgttttaccaattcagtatctccatcggtc
ttactaaccaccgatgtcgccgctcgaggattagatatcccgcttgttgacctggtaatc
cagtttgatccaccaacagatcctaaggcatacctccaccgatgcggtcgtgctggccgg
gctggacgtcgtggcctaagtgtcatattgctctgtcctggccgagaagaagattacata
cccttccttgaagtccgaaaaacacctgtatcacttcttgaatctcctccggtagcttta
tccgacactctcgcgacagaagcaacaagcaaaatccgggaaactgtccttcgtgaccgt
gcattgcacgacaaagcccagaaggccttcgtcagttgggtccgcagctacactaagcat
caagctagtagcatctttcgtatcacggacatagactgggaagaagcaggtcgcgcgtgg
ggcttgctcaagctgccgaaaatgccagagctgcagaagttctctggggacaggacactc
ggagtaaccctggactgggacaaatattcctacaaggataagcagcgagagaaacaccgt
caagaatctctaaacgctgccacaacccataaccccctgaaacgccccgccccatcatcc
tcttcaaacaacgacacagcgccatggagcaagactctcgaaaagaaatccgacaaagaa
aaacggcgcgaacgcaaacgcgcaaagaaagagagagaacattgggagaagatgacggaa
gaagagaaaaccaaatctcgcgagacacgccagatgcttgaagagctccggaaaaagaac
cggcaagagctcaacgcaaaatcccacacttcttctagcgttctttcaaagccgcaagaa
gcggagctcgatggcgagtcggagttcgagggcttcgactaa
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