Coccidioides posadasii: 9694287
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Entry
9694287 CDS
T01332
Symbol
D8B26_002943
Name
(RefSeq) uncharacterized protein
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
cpw
Coccidioides posadasii
Pathway
cpw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
9694287 (D8B26_002943)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpw03021
]
9694287 (D8B26_002943)
Enzymes [BR:
cpw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
9694287 (D8B26_002943)
Transcription machinery [BR:
cpw03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
9694287 (D8B26_002943)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
9694287
NCBI-ProteinID:
XP_003068804
UniProt:
C5PA97
LinkDB
All DBs
Position
2:complement(join(1297670..1299259,1299316..1302127,1302182..1302667,1302737..1302921))
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AA seq
1690 aa
AA seq
DB search
MASFTRPVSSTISGVDFEVLSDNEIKSVSVKRIHNTPTLDSFNNPVPGGLYDPALGAWGD
HICTTCRLNAWSCAGHSGHIELPVHVYNVTFFDQLFRLLKAQCIYCHRFRMSKIQINTYV
CKLRLLQYGLVEEASTIGTMELRKGKHNKGDGESDSSEDEDEEDLIDRRNAYVQKCISGL
ASYKTRQNYMKMAKNPAAAEMRRNLVRDFLKDVANVKKCASCSGISPPYRRDRYSKIFRK
SLPQKAKAAMVAAGFQIPNPLVLMEEANRLSKKHKTIQNEDSVNGIIDDGNISVITETHG
AEQQVSMGNAVLAAVEDTGSSEPGGQLDDSQQYIPSSEVYASVRFLFEKEQEILDLVYDS
RPGSGRRSHVNADMFFIKNLLVPPNKYRPAAQQGPGQIMEAQQNTSFTRILKLCDQINQI
SRERQGDNGESISRIRSYRDLLHAIVQLQDAVNSLIDRDRNPAQGAAGIQNEDGIKQRLE
KKDGLFRKNMMGKRVNFAARSVISPDPNIETNEIGIPLVFAKKLTYPEPVTNHNYWELKQ
AVINGPDIYPGAAAVENELGQVVNLKFKSVDERIAIANMLLSPSNWKLKRSRNKKVYRHL
TTGDIVLMNRQPTLHKPSIMGHRARVLTGERTIRMHYANCNTYNADFDGDEMNLHFPQNE
IARAEAMQLADTDHQYLVATSGKPLRGLIQDHISMGTWFTSRDSLFDEEDYHQLLYSCLR
PENSHTVSEKIELMPPTILKPKPRWTGKQIISTILKNITPENRAGLNLIGKSSTPGDRWE
IGSEEGKVIVKDGELLCGILDKAQLGPSAGGLIHSVHEVFGHVVAGKLIGILGRLLTRFL
QMRAFTCGMDDLRLTKKGDEERKKQLKRGDNLGHEVALQYVTLDESPVEDKETELQRRLE
DVLRDDEKQAGLDSMFNSRTAGLSSDITAACLPSGLEKPFPWNQMQAMTVSGAKGSVVNA
NLISCNLGQQVLEGRRVPVMISGKTLPSFKPFETKLVAGGYVSGRFLTGIKPQEYYFHAM
AGREGLIDTAVKTSRSGYLQRCLIKGMEGLKAEYDNSVRDTTDGTLVQFLYGEDGLDITK
QKHLQDFSFLAQNYLSILSQVNGMDEFNKVHSEVAAKWNKSAIKKVKRTGQVDAKDPVLA
HYHPGANFGSTSESFATALKEYEKKNPDKLLKDKGQGIDGISKKDFEHIMNMKYMRSVVD
PGEAVGIVAGQSIGEPSTQMTLNTFHLAGHSAKNVTLGIPRLREIVMTASTQILTPTMSA
NFYEQVSTKDRELFAKGISRLTLAEVVDKLSVHERISNRGNVKAKVYDIHINFFPAEEYT
QEYAIKVQDVLETLEKRFVPKLVKLTRAELKKRTSEKSLSDFSAAQPEIGASVGVVEEGP
RNTEGREAANDDDEDEDQDDAKRARSSQNRSNQVSYEAPDEDDQDIIRRQDSSELDSEDE
DESSENKEKRPASGDEDVEMKDASDVEDEDKEREESIRDKHAEVTRFKFDPKKGTSCIIQ
LQYDVSTPKLLLLPLVENATRAAVIQFIPGLGSCTYVPEERDTPAHILTDGVNLLAMRDY
QHIINMHTLYSNSIHHMLTLYGVEAARASIVREMDSVFKSHSIAVDNRHLNLIGDVMTQS
GGFRPFNRMGIVKDSTSPFMKMSFETTVRFLRDAVLERDWDNLAAPSSRIVMGRVNTVGT
GSFDVLAPVG
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atggcgagctttactcgacccgtatcttccacaatcagtggagtggatttcgaagtcctt
tccgataacgaaatcaaatcggtatcagtgaaacgcatacacaatacgcccactctcgat
tcgttcaataaccccgtccctggaggtctatatgacccggctcttggtgcatggggtgat
catatatgcacaacatgtcgattgaatgcatggtcttgcgctggccactcaggccacatt
gagctgccggttcacgtttataatgttacattttttgatcagctctttcggctcttaaaa
gctcagtgcatttactgccaccgattccgaatgtcgaagatccagataaatacatacgtt
tgcaaattgcggcttttgcagtatggtttggtggaagaggcttcgacgattgggacaatg
gagctccgaaagggcaaacataataaaggggatggcgagtctgacagcagtgaggacgag
gacgaagaagatcttattgatcgccggaatgcctatgtccaaaaatgcatctccggtctt
gcgtcttataagacgagacagaactatatgaaaatggcaaaaaatccggcagcggcagaa
atgaggagaaatttagtgcgcgacttcctaaaagatgttgcaaatgtcaaaaaatgcgct
tcttgtagtggcatttctcctccatatcgaagagataggtactcaaaaatcttccgtaaa
tctttgccgcaaaaagccaaagctgccatggttgccgctggctttcagattccgaacccc
ctcgttttgatggaggaggccaaccgtctctccaaaaagcacaaaacgatacaaaacgag
gacagtgtcaatggaattattgatgatggcaatatcagtgttatcactgagacacatggc
gctgagcaacaagtgtcaatgggaaatgcagttttagcagcagtcgaggacacgggatcg
tcggaacccggtggtcaactagacgattctcagcagtacataccatcatcggaagtctat
gcatctgtgcgatttttatttgagaaagagcaggagatattggatttggtctatgattca
aggcccggctcagggcggcggtctcatgtgaacgccgatatgttttttatcaaaaaccta
ctcgtgccccccaacaagtaccgcccggccgcacagcaaggtcctggtcaaattatggaa
gcccagcaaaatacttccttcactcgaattttaaaactatgcgatcaaatcaaccaaatc
agccgagagaggcagggtgacaatggtgaatcgatatcacggattcgaagttatcgtgat
ctcctccacgcaattgtacagttgcaagatgctgtcaatagtttaattgaccgtgacaga
aatcctgcgcaaggagcagcaggtattcagaatgaggacggtatcaagcaaaggctagaa
aagaaggacggcctgttcagaaagaacatgatgggaaaacgtgtcaactttgcagcccga
agcgtcatatcccccgatccaaatatcgaaacgaacgaaattggaattcctcttgtcttt
gccaaaaagcttacctatccagagccggtgacgaatcacaattactgggagctcaagcaa
gcggtgatcaatggtccagatatctatcctggtgctgcagctgtcgaaaatgaactcgga
caggttgtcaatttgaaattcaagtctgtcgatgaacgtattgcaattgcaaatatgctt
ctatctccatcaaattggaaattgaaacgatcgaggaataagaaagtctatcgacaccta
acaactggagatatagtgctgatgaaccgacagccaacactgcataaaccatccataatg
ggacatcgtgctagagtattaactggagaaaggacaattcgaatgcactacgccaattgc
aacacatataatgcagactttgacggtgacgaaatgaacttgcatttccctcaaaatgag
attgcacgagctgaggccatgcaactggctgatacagaccatcaatatcttgtcgcaact
tccggaaagcctctccgtggcctaatccaagatcatatttccatgggaacttggttcaca
tctcgggacagtctttttgacgaggaagattaccaccagcttctttatagctgtctgcgg
ccagagaactcgcacacagttagcgagaagattgaacttatgccacctaccattcttaag
cctaaaccaagatggaccgggaagcagattatctctaccattttaaaaaatattactccc
gaaaatcgagctggtttgaatctaataggcaagtcctccacgccaggagacagatgggag
ataggctctgaagaaggcaaagttatcgtcaaagacggagagctactgtgtggtatattg
gacaaggcccagcttgggcctagcgccggtggtcttatccactcggttcatgaggttttt
gggcatgttgttgccgggaagctcatcggtattctgggacgactgcttactaggttcttg
caaatgcgcgcctttacttgtggcatggatgatcttcggctgaccaagaagggcgatgaa
gagcgtaaaaagcaactgaagaggggtgacaatcttggccacgaggttgccctccagtat
gttaccctcgacgagagccccgttgaggataaagagaccgagttgcaaaggcgactggaa
gatgtacttcgggacgatgaaaagcaagctggcttggatagcatgttcaactccagaaca
gctggactttcatccgatatcacggctgcttgcttgccttctggccttgaaaagcctttc
ccatggaatcaaatgcaagccatgacggtgtctggtgctaaaggttcagtggttaatgca
aacttgatttcctgcaatttgggtcaacaggtgctggaaggccgtagagtgccagttatg
attagtgggaagaccttgccatccttcaaaccgtttgaaaccaagcttgtggccggtggt
tatgtctctggtcgtttccttactggaatcaagcctcaagagtattatttccacgccatg
gccggacgagaaggacttatcgacactgcggttaagacctctagatccgggtacctccag
cgctgtttgatcaagggaatggaaggtttgaaagcagagtacgataactcagtgcgggat
actacggacggaactcttgtgcaattcctttacggagaagacggtttggatatcacgaag
caaaagcatcttcaagatttcagtttcttagctcagaactatttgtccatcctttcacaa
gttaatggcatggacgagttcaacaaagtccatagcgaagttgctgccaagtggaacaag
agcgccatcaaaaaggttaaaaggactgggcaagtggatgctaaggacccagtcctggct
cattatcatccaggagctaatttcggaagcacatctgaatcttttgctactgcccttaaa
gagtacgagaagaagaatcccgacaagcttttaaaagacaagggccaaggaatcgatggc
atctctaaaaaggactttgaacatatcatgaacatgaaatatatgcgttcggtggtggat
cctggagaagccgttggaattgttgccgggcagtctattggagagccatctactcaaatg
acgctgaatactttccatttggctggtcactccgcgaaaaacgtcacgcttggtattcct
cgacttagggaaattgtcatgacggctagtactcagatcctaaccccgactatgtctgcc
aatttttatgagcaagtttccaccaaagatcgggagctatttgccaaaggcattagcaga
cttactcttgccgaggttgttgataaactctcggtccatgagcggatatccaaccggggt
aacgtgaaagcgaaagtttatgatatccatattaacttcttccctgctgaagagtatacc
caagagtacgctatcaaagttcaagatgtgcttgaaacattggaaaaacgattcgttccg
aaacttgtcaagctaacaagggcggaactcaagaaacgaacaagcgagaagtccctctct
gatttctctgctgctcagccagaaattggagcttctgtcggagtcgtcgaagaaggccca
cgaaatactgaaggaagagaggccgccaatgacgatgatgaagatgaagatcaagacgat
gcgaagagagcaagatcgtcgcaaaacaggtcgaaccaagtttcatatgaagcccctgat
gaagatgaccaagacatcattcggcgccaagatagctcagagctagactccgaagatgaa
gatgagagcagcgaaaacaaggagaagagaccggcatcaggtgatgaagacgtcgagatg
aaagacgcttctgatgtggaagatgaggacaaggaacgcgaggaatcgatccgagacaaa
catgctgaagtcactcgattcaaattcgatcccaagaaaggcacgtcgtgcattatccaa
cttcagtatgacgtctcaacgcccaagctccttctgctgcctcttgtagagaacgccact
cgcgcagccgttatccaattcatccccggccttggcagctgcacatacgtgcccgaagaa
agagatacaccggcccacatacttactgacggtgtcaatctcctcgctatgcgcgattat
cagcacattatcaacatgcacaccctgtacagtaattccattcaccacatgcttacactc
tatggtgttgaggcagcgcgtgcaagcattgttcgcgaaatggactccgttttcaagagc
cacagcattgccgtggataaccgccatctgaacctcattggcgacgtgatgactcagagt
ggaggattccgcccattcaaccgtatgggcattgtgaaagacagtacatcaccgtttatg
aagatgagtttcgaaactactgtacgattcttaagggatgcagtcctagagcgtgactgg
gacaatcttgctgcacctagtagcaggattgtcatgggaagagtgaacactgttggtact
gggtcttttgacgttcttgcgccagttggataa
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integrated database retrieval system
