Coccidioides posadasii: 9694399
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Entry
9694399 CDS
T01332
Symbol
RDH54, D8B26_002808
Name
(RefSeq) helicase
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
cpw
Coccidioides posadasii
Pathway
cpw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
9694399 (RDH54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpw03400
]
9694399 (RDH54)
DNA repair and recombination proteins [BR:
cpw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
9694399 (RDH54)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SWI2_SNF2
RPN13_C
Motif
Other DBs
NCBI-GeneID:
9694399
NCBI-ProteinID:
XP_003068916
UniProt:
C5PAK9
LinkDB
All DBs
Position
2:join(908211..908521,908615..911189)
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AA seq
961 aa
AA seq
DB search
MPFKPFKPPLIRRPPSAPQTQHDTSESVSQPSAKRRRIGDQASDVATEEGVKPNGTVHVV
KSGQALYRKPSILANNSSKLLDKTGRNDTASGDGGVEGYYNVLWRKFTAKKHRTWDGDGI
LSLRGGYAYLQDVSGKDMGRIMFNSPLKPGSALSIGGKDVEVDSILSKEEYLAGRSFLGV
NRESPDVLLKKPELPRMTPISVSRIGSVRKPDATKPAVIGRRVEVREAEEAVKKVLNVAA
PKSIATNSRFKNPLKEDSVLPSKPNKEVTPRHDQNQPGAIVMKRPESVPKDKQIVDVVVD
PLLGKHLREHQREGVKFLYECVMGMRPFNGEGAILADEMGLGKTLQTIALLWTLMKQNPI
YGASPVVKKALIVCPVTLIKNWQKEFRKWLGNDRLGVFVADGKHMRLTDFTMGMSYNVMI
IGYERLRTVQEELAKGRGIDIVIADEGHRLKTVQNKSAQAIQSLNTARRIILSGTPIQND
LSEFFAMVDFVNPGLLGTFKMFMKEFEGPIVKSRQPGASKKDIEKGEARSEELAGLTSKF
ILRRTADILSKHLPPKTEYILFCNPTPAQANIYRHVIASPIFQSALGNSESALQLITILK
KLCNSPSLLTLKVLKDENPNCTISSLISTLPPNLLRHFSPASSGKIRVLDQLLHNLHSTT
SEKIVLVSNYTSTLNLLAALLSSLSLPYLRLDGSTPASKRQFLVDDFNRSSSKSCFAFLL
SAKAGGIGLNLTGASRLVLFDVDWNPATDIQAMARIHRDGQKRHCHIYRMLLRGGLEEKI
WQRQVTKLGLSDSVMDQKNSVAHFSREELRDLFRLDEDAECQTHDLLGCECEGRGRDVSI
IADVGDNGDNLSDSESLTESDGSDEIPDPPSLIKASKLLSHPSTGERKNAANKRRRKMRS
LMQYSHISTPLLVTKHRKSLEEQIGDDVLLSLLGEEGNGVRYLFKRDGFAGLSTNTDKMG
I
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgccattcaagccctttaagcctccgctcatccgaaggccgccctccgctccccaaacg
cagcacgatacctctgaatcggtttcccagccctccgctaaacggcgtcgtatcggcgac
caggccagcgatgtagcgactgaagaaggagtgaagcctaatgggacagtacatgttgtg
aaaagtggccaggctctctatcggaaaccgtcgatcttggcgaataactcgtccaagctt
ctcgataagactgggcggaatgacacggcaagcggcgacggcggcgtagagggctactac
aatgttctttggcgaaaatttacggccaaaaagcataggacatgggatggtgacgggatc
ttgtcccttcgaggtggctatgcctatctccaagatgtttctggaaaggacatgggccgg
atcatgttcaattctcccctaaaacctggctcagcgctgtccattggcgggaaggatgtt
gaggtcgactcaatactttccaaggaagaatatctcgccggtcgttcattcctcggcgta
aatagggagtcgcctgatgtattattgaagaagccagagctaccgcgaatgacaccgatt
agtgtctctcgcattggttccgtacgaaaaccagatgctactaagccggcagtgattgga
aggagggtagaagtacgtgaggccgaagaagctgtaaaaaaggtgcttaatgttgcagca
ccaaaaagtattgcaacgaatagtcgtttcaaaaaccccttgaaagaagactctgtactg
ccgtcgaaaccgaacaaagaagtcactccacgacatgaccaaaaccagccgggagcaatc
gtgatgaaacgcccagaatcagttccaaaggataagcagatcgttgatgtcgtcgttgac
cctctcctgggaaaacatcttcgcgaacatcagcgcgagggtgtcaagtttctttacgaa
tgcgttatgggaatgcgccctttcaacggtgaaggggccatccttgcggatgaaatggga
cttgggaaaacattacagacaatagctttgctgtggactctaatgaagcaaaatccaata
tacggggcatccccagtggttaaaaaggctctcatcgtatgcccggtgacgctgattaag
aattggcaaaaagaattcagaaaatggttaggaaatgatcgacttggcgtgtttgttgcg
gatggaaaacacatgaggcttacggattttacgatgggaatgagttataatgttatgatc
atcgggtatgaaagattacgaactgtgcaagaggaattggccaaaggtcgtgggattgat
atcgtcatcgcagatgaagggcacagattgaagaccgttcagaataaaagtgcccaggcg
attcaatcccttaatactgctcgacgtatcattctttcgggaacgccgattcaaaacgac
ttgagtgagttcttcgctatggtggattttgtcaaccctggtctgttgggcactttcaaa
atgtttatgaaagaatttgaaggccctattgtgaagtccaggcagccaggcgcgtccaag
aaggacatcgaaaagggtgaggctagaagcgaggagttagcaggtctaacgtccaagttt
atcttgcgccggaccgcagatatcctttctaagcatctcccacccaaaactgaatatatc
ctgttttgcaatccgactcctgcccaagcgaatatataccgccatgtgatcgcctctccg
atattccagtcagcactcggaaactcggagagtgctttgcagcttattacgattctaaag
aagctctgcaatagtccttctttgctcactctaaaagtcttaaaggatgagaacccgaat
tgtacaatcagctctctcatatcgaccctcccacctaatctgcttcgacatttttcaccc
gcatcgagcggcaaaattagagttctggaccagctgctccacaacctgcacagcacaacg
tcggagaagattgtgctagtgtcaaactacacatcaactctcaaccttctcgcggctctt
ttgtcgtctctatccctcccatatctacgcctcgatggttctaccccagccagcaaacgt
caattccttgttgacgattttaaccgctcgtcatccaaatcctgcttcgcatttctcctt
tctgcaaaagctggggggatcgggctcaatctcaccggcgccagccgcctggtgctcttt
gatgtggactggaatcccgcgacggacatccaggccatggcgcgtatccatcgtgacggg
caaaagagacactgtcacatctaccgaatgttacttagaggcggactcgaggagaagatc
tggcaaagacaagttacgaaacttggtctatcagatagcgtgatggatcagaaaaacagc
gtagcgcatttttctagggaagaattgagagatttgtttagactcgatgaggatgccgag
tgtcaaacacatgaccttttaggctgcgagtgcgaggggagaggaagagatgtttcaatt
atagcggatgttggcgataatggggacaacctgtctgactccgagagcctcacggagagt
gacggttcagatgaaatcccagatccgccttcgctaatcaaggcgtctaaacttctcagc
catccatcaaccggcgaaagaaaaaatgctgccaacaagagaagaaggaaaatgcgctct
ctcatgcagtattctcacattagcactccacttctcgtcaccaaacatagaaaatcacta
gaagagcagattggcgacgatgttcttttatcgttactcggagaagaaggcaacggggtc
cgatacttgtttaaacgggatggcttcgcagggttatcgacaaatacagacaaaatgggg
atttaa
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