KEGG   Coccidioides posadasii: 9694419
Entry
9694419           CDS       T01332                                 
Symbol
LSM7, D8B26_002786
Name
(RefSeq) Sm-like protein lsm7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
cpw  Coccidioides posadasii
Pathway
cpw03018  RNA degradation
cpw03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    9694419 (LSM7)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    9694419 (LSM7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpw03019]
    9694419 (LSM7)
   03041 Spliceosome [BR:cpw03041]
    9694419 (LSM7)
Messenger RNA biogenesis [BR:cpw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     9694419 (LSM7)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     9694419 (LSM7)
Spliceosome [BR:cpw03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    9694419 (LSM7)
SSDB
Motif
Pfam: LSM DUF150_C DUF6897 FoP_duplication
Other DBs
NCBI-GeneID: 9694419
NCBI-ProteinID: XP_003068936
UniProt: C5PAM9
LinkDB
Position
2:join(847696..847930,848319..848390,848464..848591)
AA seq 144 aa
MSERGSFRGGFSRSGGRGGGGRGGRGGRGGGAAGGGAGYQQQQQQQGQQQEKPKKENILD
LTKYMDKEVHVKFSGGREVTGTLKGYDQLMNLVLDEVKETMRDDEGNETTRSLGLIVARG
TLLVLISPADGSEEIANPFVQQEE
NT seq 435 nt   +upstreamnt  +downstreamnt
atgtctgaacggggctcctttcgcggaggcttctctcgctctggcggccggggcggcgga
gggcgcggcgggcgaggtggaagaggtggcggtgcagctggtggcggtgcaggctaccag
cagcaacaacagcagcaaggccagcagcaggagaaaccgaagaaagagaacatcctggac
ttgaccaagtatatggacaaggaggtccatgtgaagttcagcggtggaagagaagttact
ggcacccttaaagggtacgaccaactcatgaatctcgtcctcgacgaagtaaaggaaacc
atgcgtgatgacgagggcaacgagacaacccgctctctaggcctgattgttgcacgtgga
acgctgctagtcctaatctcccctgctgatggaagtgaagagatagccaatccttttgta
cagcaagaggaatga

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