Coccidioides posadasii: 9694524
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Entry
9694524 CDS
T01332
Symbol
ROK1, D8B26_005544
Name
(RefSeq) RNA-dependent ATPase rok1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
cpw
Coccidioides posadasii
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpw03009
]
9694524 (ROK1)
Enzymes [BR:
cpw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
9694524 (ROK1)
Ribosome biogenesis [BR:
cpw03009
]
Eukaryotic type
90S particles
Helicases
9694524 (ROK1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25_NTPase-like
T4SS-DNA_transf
Motif
Other DBs
NCBI-GeneID:
9694524
NCBI-ProteinID:
XP_003069041
UniProt:
C5P8C5
LinkDB
All DBs
Position
3:complement(1781161..1783353)
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AA seq
730 aa
AA seq
DB search
MDAFKLLTRSIKLKGSQLGSSSISSHLPSAGEANNPQLFPASEADKTRGTKRKRESGEDT
ELPNEIPVPDFFGSGSTAAESPKAQRKRVTGKDADAEGQHGEETSMPEEERKSILKSHKI
KITDLRTPPFRAVDADISGKKSKGKKKKVEEPPPLTRKQLKAAQRLYPEPLTSFDKLRTR
YHISRRLSDNIASQGYTVPTEVQLGSLPLLLGNAPAPNERTADDESLRSQLEREPDLLVV
APTGSGKTLSFMIPLINKIMKHHHDNPGLKEILAIVVAPTKELVLQIVNEGRKLTAGTGV
KVSAVRKGMRIVEERGQEKRSLEEENDGDDSTASSDEEIHSSEGEKSKDIPLTKSDILVC
TPLVLANALSDGGKRDVAPLPSVQKLVLDEADVLLDPLFREQTLSIWRACTHPQLRVGLW
SATMGSNIEELTKSTIKERQGLLGLKDESSLIRLVVGLKDTAIPNISHKLVYAATEQGKL
LGLRQLLHPTSTSRSTTHLRPPFLIFTQTIARAIALHSELMYDIPAEAGGSSRIAVLHSE
LSDSKRSDVMAGFRKGEIWVLITTDLLARGVDFRGINGVVNYDIPNSSASYVHRVGRTGR
AGREGGVAVTFYTKEDIPYVKNIANVISASENLRGTEEGERIPKWLLDALPSLSKNDKKD
LKKYGVKARRPSTISDKTTSKKTRISTKSGFDRRMDNKRKGAIKGSQRRKAREQLNDEEN
EDDVWNGIDD
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttttaagctgcttacccgatctatcaagctaaaaggctcccagctcgggtcc
tcgtcaatctccagccaccttccctcagctggcgaagcgaacaatccgcaactcttccct
gcctcagaagcagataaaactcgcggaacgaagcgaaagagagagtctggggaggacact
gagctaccgaatgagattccggttcccgatttctttggctcgggatctacagcagcagag
tcgccaaaagctcagcggaaacgagtgacgggaaaggatgccgacgctgagggtcaacat
ggcgaggagacctccatgccagaagaagagcgcaagtctatattgaagtcccataagatc
aaaatcaccgacctacgaactccgccgttccgcgccgttgacgccgatataagtgggaag
aaatcgaaaggaaagaaaaagaaagttgaagaacctcccccgttgacacgaaagcagcta
aaggctgctcagagactctatcccgagcccctgacatccttcgataaacttaggacaaga
taccacatctcaagacggctttcagacaatatcgccagtcaggggtatactgttcccacg
gaagtccagttgggatcgttaccgttattactaggaaatgccccggcgccaaatgaacgg
actgcggacgatgagtcattacgatcgcagttggagcgggagcccgaccttcttgtggtt
gcgccgactggtagtgggaaaaccctctcgtttatgattcccttgataaacaagataatg
aagcaccaccatgacaaccccggtcttaaagagattcttgccatagtagtcgcaccaaca
aaggagcttgtgttgcagattgtaaacgagggtcgaaaattaacagccggaaccggagtc
aaagtttctgcggtgcgaaaaggaatgcggatcgtggaggaaagaggtcaagagaagaga
tccttagaggaagaaaacgatggcgatgactctaccgcgtctagtgatgaggagatccac
tcaagtgaaggagaaaagtcgaaggatatccctcttacgaaaagcgatattttagtgtgc
acgcccctagttctagcaaacgcgctgtcggacggtgggaagagagatgttgctccttta
ccatccgtccagaagctcgtgctagatgaagccgatgtccttcttgaccctctatttcgg
gagcagactctcagtatatggagagcgtgcacacatcctcagctgagagttgggctttgg
tccgcaacgatgggctctaatatcgaagaacttacaaagtcaacgattaaagagcggcag
ggacttttaggattaaaggacgaatcatcccttatccgactcgttgtgggattaaaggat
acggctattcccaacatatcacataaacttgtctatgctgcaaccgaacaaggcaaactc
ctcgggctgcgccaattactgcacccaactagtacaagcagatctactacgcatcttcgc
cccccctttttaatatttacgcaaacaatcgcccgagccatagctctacattcagaactc
atgtatgatatcccagcggaagcgggggggtcatcacgcattgctgttttgcattcagaa
ctctcagactctaagcgatcagacgttatggccggatttcgaaagggcgagatctgggtc
ctgattaccaccgacttattagctcgtggggtcgactttcgaggaataaatggcgtcgtg
aattatgatattcccaactccagcgcctcatatgttcaccgtgttgggcgaactggtcgt
gcgggccgtgagggcggcgtggcagtgaccttttataccaaagaagatattccatatgtt
aagaatattgcaaatgtgatatccgcaagcgagaacctacgtggcacagaagaaggtgaa
cggattccaaaatggctgcttgatgcattaccgagtctttcaaagaatgacaagaaggac
ttgaaaaagtatggtgttaaggctcgaaggccttcaaccatcagtgacaagacgacaagc
aagaaaacgaggattagtaccaaaagtggttttgataggagaatggataataaacggaaa
ggtgcgattaagggaagtcagcgacgaaaagcgagggaacaattaaatgatgaggagaac
gaagatgatgtctggaatggcatcgacgactaa
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