Coccidioides posadasii: 9694574
Help
Entry
9694574 CDS
T01332
Symbol
D8B26_002545
Name
(RefSeq) uncharacterized protein
KO
K14328
regulator of nonsense transcripts 3
Organism
cpw
Coccidioides posadasii
Pathway
cpw03013
Nucleocytoplasmic transport
cpw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
9694574 (D8B26_002545)
03015 mRNA surveillance pathway
9694574 (D8B26_002545)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpw03019
]
9694574 (D8B26_002545)
Messenger RNA biogenesis [BR:
cpw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
9694574 (D8B26_002545)
mRNA cycle factors
P-body specific factors
9694574 (D8B26_002545)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
9694574
NCBI-ProteinID:
XP_003069079
UniProt:
C5P684
LinkDB
All DBs
Position
2:join(136978..137237,137327..138866)
Genome browser
AA seq
599 aa
AA seq
DB search
MAHRPSPTSKSTTTAGLLPISPAAAAQHAPAKPASSRASAPRLKLLVRRLPPGLTQVEFE
TALGPEWTVGKGKLDWLAYKPGKLSADPSKPSKPSRAYLRVTASAIVPELSDRVRETSFQ
DSRNTFADPALLGPPTLEYAPYPRVPGGKVRKDARMGTIDQDPEFIAFLESLTNPVPKPS
TDDIVEPDKDEKITITPLIQYLKDKKASKAKEASAPARATKPSRSGAKDVKVEKIQAKKV
LSRAEKAAAPTSEKQQPKIDKAAKDAAKAANKQIASQASKQKGAKPAPASKQSEVPPQPP
AAAPPGPPPQRKRERGNLSAATKILRRDLGLTPPRKRGEKSSTNTAATSSATESKQAAPT
PSTGSTKQQATTTKPSKENPPAKVTPPKLLKKPPTEPAAARNAAKATNPPTGPKNAPPES
AKAAAPQSTATQAFLKHANPSQGVTEDLLESGFSKFGKVINVEIDKKKGFGYVDFAEPEA
LRKAIQASPVQIAQSQVVVLERRSTAAVAQARGNHMRNHPPPVMPAHSPSGGGAGGGGGG
GGPTPARPPQGPRGGGRGGPRNRGGYGRGRNGPGGGDRSNNANTGPKQTATAPPAKTTS
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggctcaccggccgtcaccgacgtcaaaatccaccaccactgcgggtcttctccccatt
tctccagctgccgccgcccaacatgcgcccgcgaagcccgcctccagcagagcgtctgcc
ccgagactcaagctcctggtgcgacgactgcccccaggcctgacccaggtcgagttcgaa
accgccctgggcccggagtggacagtgggcaagggcaaactggactggcttgcctacaag
ccgggaaaattgtctgccgatccctcaaagccctcgaaaccatctcgcgcctaccttcgt
gttaccgcctccgccattgtccctgagctgtccgatagagtccgcgagacctccttccag
gactcacgcaacaccttcgccgatcctgctctccttgggcctccaaccctcgaatatgcc
ccgtaccctcgcgttcccggaggcaaggtccgcaaggacgcgaggatgggtacgatcgac
caggatcccgaattcatcgcctttctcgaaagcctgaccaaccccgtccctaaaccgagc
acagacgacattgtggagcccgacaaggacgagaagattaccatcacacccttgatccag
tacctcaaggacaagaaggccagcaaggcaaaagaggccagtgcaccggccagggctacg
aagccatccaggtccggagccaaggatgtcaaggtggagaagatccaggcgaagaaggtc
ctcagccgcgccgagaaggctgcagcgccaacctcggaaaaacaacaaccaaaaatcgac
aaggcggcaaaggacgctgccaaagctgctaacaaacagattgccagccaagcgtctaag
cagaaaggagcaaaacccgctccagctagcaaacagagcgaggtcccaccgcagccaccc
gcagcggcgccgccgggtccgccgccccaacgcaagcgagaacgaggcaatttgagtgca
gctaccaagattcttcgacgagacttgggactcacgccgccccgcaaaaggggagagaag
tccagcacaaacacggctgctacgtccagtgcaaccgaatccaaacaggccgccccgacg
ccttctacagggagtaccaaacagcaggctacgacgactaaaccttccaaggagaatcca
ccggccaaggttactcctccgaagctactcaagaagcctcctacagagcctgcagcggcg
cggaacgcggccaaggcaacgaatcctcccacgggtccgaaaaatgctccgccagagagt
gccaaggctgccgccccccaatcaaccgccacgcaggccttcctaaaacacgcgaacccg
tcgcaaggcgtaacagaagacctgctcgaatcgggattctccaagttcggcaaggtgatc
aatgttgagatagacaagaaaaaaggattcggctatgtcgattttgcggagccagaggca
ttgcggaaagcaatccaagcaagcccggtgcagatcgcgcagagccaggtggtcgtcttg
gagcgacggtcgacagcagcagttgcgcaggcgcgtgggaaccacatgcggaaccaccct
ccgccggtgatgcccgcacactccccctcaggcggcggcgcaggcggaggcggtggtggt
ggcgggcctacaccagcccgaccaccacaaggacctaggggcggaggccgcggaggacca
agaaatcgcggtggttacggcagaggaagaaatggccccggcggaggcgatcggtctaat
aatgcgaacacaggaccaaagcaaactgcaactgcccctcccgccaaaactacatcatga
DBGET
integrated database retrieval system
