Coccidioides posadasii: 9695119
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Entry
9695119 CDS
T01332
Symbol
RET1, D8B26_006449
Name
(RefSeq) DNA-directed RNA polymerase III core subunit ret1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
cpw
Coccidioides posadasii
Pathway
cpw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
9695119 (RET1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpw03021
]
9695119 (RET1)
Enzymes [BR:
cpw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
9695119 (RET1)
Transcription machinery [BR:
cpw03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
9695119 (RET1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
9695119
NCBI-ProteinID:
XP_003069624
UniProt:
C5P7S9
LinkDB
All DBs
Position
3:complement(join(4658555..4661375,4661470..4661880,4661954..4662177,4662250..4662432,4662519..4662581))
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AA seq
1233 aa
AA seq
DB search
MPPKKRPQGAAQQNPSADSLNSTSDPSAQSSTGASGMPAGNSKRKRTGDIKAAPAESQGK
EGGADARRKSGPAGERKGRGHDDFEDLLQPFYYNKSLTDPINTEKDKWNLLPAFLKVKGL
VKQHIDSYNYFVEVQLKKIVQASAEIRSDVDPNFYIRFHDIYLGSPRRADEEQSEDARFK
IESTVTPNECRLRDMTYAAPILVDFEYVRGRQRVKRNGTAIGRMPVMLRSSKCVLSKKSP
REMYLLHECPLDPGGYFIVNGTEKVILVQEQLSKNRVIVETDPKKEIVQASVTSSSNERK
SKSYVILKKDRIYLRHNVLSDDIPVVILLKAMGIQSDKEMLLLVAGVDSVYQEDFAINFE
ESIKLGIYTQQQALEYLGSHIKITRKPNGFGGGRRNYIQEAVEAIASVIISHVQVENMNF
RPKALYVAHMARRVLMAKHDSSLVDDRDYVGNKRLELAGQLLALLFEDLFKKFCFDIKMN
IDKVLKKPVRTEAFDAFSVVAIHGNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLS
YISALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCPSDTPEGEACGLVKNLALMTHITT
NDEEEPVRKLVFALGAEDVQAVGGREFYGQGAYIIFLNGSPIALTRRPKHFLNSFRRLRR
MGRVSEFVSVYINHHQSAVHIATDDGRICRPLIIVENQKSKVTDLHLGMLRNGTMEFDDF
LAQGLVEYLDVNEENDSYIAVYENEINENTTHLEIEPFTILGAVAGLIPYPHHNQSPRNT
YQCAMGKQAIGAIANNQFLRIDSLLYTMVYPQKPMVKTRTIELVKYDKLPAGQSATVAVM
SYSGYDIEDALVLNKGSVDRGFGRCQVFRKYSANLKSYSNGTKDRLLGPDRQDGVPIRKH
ALLDNDGLAAVGEKVSSGEVYINKATPENALSSGITGSDAGGPIAYIPSPQTYKLPDPSY
IDKVMISTTEGENQLLKVQTRQTRRPEVGDKFSSRHGQKGVVGIIAEQADMPFTDQGIVP
DIIMNPHGFPSRMTVGKMLELVAGKAGILSGQFGYGTAFGGSPVEEMSAILISKGFNYGG
KDYLTSGITGEALPAYVFTGPIYYQKLKHMVQDKMHSRARGPRAILTRQPTEGRSRDGGL
RLGEMERDCLIAYGTSQLLLERLMISSDRHEVDVCENCGFMGYLGWCQRCKTSRGVVKMV
IPYAAKLLVQELFSMNVVARLKLADEFPEERGM
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgaaaaaacggccgcagggtgctgcccagcagaacccgtccgcggattctcta
aactctacttcagatccctcagctcaaagtagcacgggcgcatcaggtatgcctgccgga
aactccaagcggaaacggaccggggacataaaggctgcgccagccgaaagccagggcaag
gagggtggtgctgatgccagaagaaagagtggcccagctggtgagcgtaaaggcagaggc
catgatgactttgaagaccttcttcaacctttttactataacaaatccctgaccgatccg
atcaacactgaaaaggacaagtggaatcttcttcctgcatttttgaaggtgaaagggctc
gtcaagcaacatatcgactcgtacaactacttcgtcgaggtacagctgaaaaagatcgtc
caagcgagtgctgaaatccgtagtgatgtggacccaaacttctacatcagatttcacgat
atttatctcggcagcccccgccgagcagatgaagagcagtcagaagatgcgcgcttcaaa
atcgaatcgaccgttaccccaaacgaatgtagactacgggatatgacctatgctgcgccg
atcctggttgattttgaatacgtccgtggacggcaacgagtgaagcggaatggaacagcg
attggccgcatgccggtcatgcttcgaagctcaaaatgcgtgctttcgaaaaaatcaccg
cgtgaaatgtacctattacacgaatgtcccttggatccgggaggctacttcatcgtaaac
ggaacggaaaaggtgattcttgtgcaggagcagctgagcaagaacagagtcatcgtggaa
acggatccgaagaaagagattgttcaggcctctgtcaccagttcgtcgaacgagagaaaa
tccaagagttacgtcatccttaagaaggatcggatatatctaagacataacgttcttagt
gatgatatacctgtcgttattttattaaaggccatgggaatacagtctgataaggaaatg
ttgcttctcgtggctggagtagacagcgtataccaggaagacttcgctatcaatttcgaa
gaatctatcaaacttggaatatatacgcaacaacaagcactggaataccttggatcacat
attaaaatcacccgaaaacctaatggctttggtggaggccgtcgaaattatattcaggag
gcagtcgaggccatcgcttcagttatcatttctcatgttcaggtggagaacatgaacttt
cgccccaaagctttgtacgtggctcacatggctcgtcgagttttaatggcaaagcatgat
tcgagtttggttgatgatcgcgactatgtcggtaataaacgattggaattggccggccag
ctccttgcgttattgtttgaggacctgtttaagaagttttgcttcgatattaaaatgaac
atcgataaggtgctgaagaagcctgtacgaaccgaagccttcgacgcgttcagcgtggtt
gcaatccacggaaatcatatcacgcagggcatgaatcgcgctatatccacgggcaactgg
agtctcaagcggtttcgcatggagcgtgcaggagttacccatgtgctcagtcgattaagc
tacatatctgcactgggtatgatgactcgtatatccagtcagttcgaaaaaactcggaaa
gtcagcggtcctcgagctctccaaccctcccaatttggcatgctttgtccctctgatacc
cctgagggtgaagcctgcggtctcgtcaagaatcttgcgctcatgacacatatcactacg
aatgacgaggaagagccggtgaggaaacttgtgtttgctttaggtgctgaagatgtgcag
gcggtgggaggacgggagttttacggccaaggagcatatattatattcttaaacggttcg
cctattgctttgactcgccgcccaaaacatttcttaaactcgttccgaaggttgagacga
atgggccgggtctcggagtttgtgagcgtatacattaaccatcaccaaagtgccgtccat
attgctactgatgatggccgaatttgtcgtccactgatcattgtcgagaaccagaagtcg
aaggttaccgatctccatcttggcatgctgcgcaatggaacaatggaattcgatgacttc
ctcgctcaaggtctcgtcgaatatcttgatgttaacgaagaaaacgattcttacattgcg
gtatacgagaatgagataaatgaaaatactacccacctggaaatcgaacctttcactatt
cttggtgctgtcgccggccttattccttatccacaccacaatcagtcaccccgaaatacc
taccaatgcgccatgggtaaacaagccataggtgctattgcaaataatcagttcttacgc
attgactctttactttacacaatggtttatcctcagaaacctatggtcaagacgaggacc
atagaacttgtaaaatatgacaaattaccagctggtcaaagtgccacggtcgctgttatg
agttactccggctacgatatcgaggacgcattggtactgaacaaagggtcagtagaccgt
ggatttggacgctgccaggtcttccgtaagtattcagcgaatctcaagagctattcaaac
ggaacaaaggatcgattactgggacccgaccgccaggatggtgtgcctattcgtaagcac
gccctacttgataacgacggattggcagctgtgggagagaaggtgagtagcggcgaggtt
tacatcaataaagcaacgcctgagaatgctttgtcttccggaattactggctcagacgct
ggagggccgattgcatacattccatctccacaaacctacaaacttccggatccaagctac
atcgataaagtcatgatatctacgacggaaggcgaaaatcaactcctcaaagtacaaaca
cgacaaacccgtcgcccagaggttggcgacaaattttcatcccgccacggacagaaaggt
gttgtaggcatcattgctgaacaagccgatatgccttttaccgaccagggcatagtccca
gatatcatcatgaacccacacggttttccctctcgtatgacagtcggtaaaatgctcgaa
cttgtcgccggcaaagccggcatcctctcaggccaatttggttacggcactgcttttggt
ggcagccctgtcgaagaaatgtcagccatactcatctccaagggcttcaactatggtggc
aaggattatctcacctctggtattacgggcgaagccctccccgcctacgtgttcactgga
cctatttactaccagaaactcaaacatatggtccaagataagatgcactcccgagctcgt
ggaccgcgggctatcctcactcgccagcctaccgaaggtcgatcacgggatggtggtctc
cgcctgggagagatggagcgtgattgtctcattgcatacggtaccagtcaattgcttctg
gagcgattaatgatttcctctgatcggcacgaagttgatgtgtgcgaaaactgcggtttt
atgggctacttgggctggtgtcagcgctgcaagacgtcaagaggagtggtgaaaatggtg
attccgtatgcagcgaagttactggttcaggagcttttcagcatgaatgtagttgcacgg
cttaagctcgcggatgagttccccgaagagagaggaatgtga
DBGET
integrated database retrieval system
