Coccidioides posadasii: 9695840
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Entry
9695840 CDS
T01332
Symbol
CRM1_2, D8B26_006880
Name
(RefSeq) Karyopherin transporter
KO
K14290
exportin-1
Organism
cpw
Coccidioides posadasii
Pathway
cpw03008
Ribosome biogenesis in eukaryotes
cpw03013
Nucleocytoplasmic transport
cpw03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
9695840 (CRM1_2)
03008 Ribosome biogenesis in eukaryotes
9695840 (CRM1_2)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
9695840 (CRM1_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpw03019
]
9695840 (CRM1_2)
03009 Ribosome biogenesis [BR:
cpw03009
]
9695840 (CRM1_2)
03016 Transfer RNA biogenesis [BR:
cpw03016
]
9695840 (CRM1_2)
03036 Chromosome and associated proteins [BR:
cpw03036
]
9695840 (CRM1_2)
Messenger RNA biogenesis [BR:
cpw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
9695840 (CRM1_2)
Ribosome biogenesis [BR:
cpw03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
9695840 (CRM1_2)
Pre-60S particles
9695840 (CRM1_2)
Transfer RNA biogenesis [BR:
cpw03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
9695840 (CRM1_2)
Chromosome and associated proteins [BR:
cpw03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
9695840 (CRM1_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
CRM1_C
Pre-PUA
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
mTOR_dom
Hemocyanin_M
Motif
Other DBs
NCBI-GeneID:
9695840
NCBI-ProteinID:
XP_003070345
UniProt:
C5P660
LinkDB
All DBs
Position
3:complement(join(5840062..5840540,5840598..5841369,5841443..5842155,5842211..5842282,5842340..5842412,5842479..5842508,5842587..5842652))
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AA seq
734 aa
AA seq
DB search
MSVSIQELDNTVRAFYEGSGDVRKQAQQSLTEFKQNPEAWLLVGNILQESNYVQTKYLAL
QVLDDVIMTRWKVLPREQCQGIRNFIVNCIIEHSKTEEKLKSERAFLNKLNLVLVSILKQ
EWPHNWPTFINEIISSCHTSLSICENNMAILRLLSEEVFDYSQDQMTSTKARNLKTTMCQ
EFSSIFQLCSEVLNTATQSSLIKATLETLLRFLNWIPLGYVFETPIINTLLNRFLDVPDF
RNVTLKCLTEIGSLQVGPQFSYDEKLVQMFTETLTTVSKIIPLSLDLRQTYAASNSRDQE
FVLNLALFLTNFFSVRLHLIERLPNLDYLTHGHFYLIRISQIDDREIFKICLEYWTRLVQ
ELYEEMQQLPITDINPLVSMGVSGLSNGGAPNPSTLANYPLRKHKYAEVLSSLRTVMIEK
MVRPEEVLIVENDEGEIVREFVKESDTIQLYKTTRECLVYLTHLDVVDTENIMADKLAKQ
VDGTEWSWANCNTLCWAIGSISGAMNEETEKRFLVTVIKDLLGLTEMKRGKDNKAVVASN
IMYIVGQYPRFLKAHWKFLKTVVNKLFEFMHETHEGVQDMACDTFIKIANKCKRHFVVHQ
PGEAEPFIDEIIGSMSKITCDLSPQQIHTFYEACGYMISAQGQKSIQDRLIENLMSLPNA
AWDSIINRANQDPATLQDGETIKVVGNIMKTNVAACSSIGSYFYSQIGRIYHDMLNMYRA
SSQLINDAVARDGK
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtttcgatacaggagctggacaacactgtccgagctttctacgaaggctcaggc
gatgttagaaaacaagcgcaacaatcattaacagagttcaaacaaaaccccgaggcctgg
ttattagtgggaaatattctacaagagtcgaactatgttcaaacaaaatatttggccttg
caggtcttagacgatgtgattatgacacgatggaaggttcttccgcgagagcaatgtcaa
ggtatccgaaacttcatcgtcaattgcatcattgaacactccaaaactgaggaaaagttg
aagagcgaaagagcatttttgaataaactcaacctcgtcctcgtttcgatcttgaaacaa
gaatggccgcataattggcctacgtttattaacgaaataatttcatcttgccacacgagt
ttgtccatctgcgagaacaacatggcgatccttcgtttattgtccgaggaagttttcgac
tattcccaggaccaaatgacttcgacaaaggcacggaacctgaaaaccacaatgtgtcaa
gagttttcttctatatttcaactatgttccgaggttcttaatactgctactcaaagcagc
ttaatcaaagcgacactagaaacgcttctccggtttctcaattggatcccgttaggttac
gtttttgagacacctatcatcaatactcttctcaatcgtttcttggacgtgcccgacttt
cgaaacgtaacattaaagtgcttgaccgagatcgggagtctacaggttggacctcaattt
tcgtacgacgagaagttggtacagatgtttacggagactttgacaactgtttccaaaatc
attcccctatcattagatttaaggcaaacttacgcggctagcaactccagggatcaagag
tttgttctcaacttggcactttttctcacaaacttctttagtgtgcgcttacatcttatc
gaaaggctccccaatcttgactacctgactcacggacatttttacctcatccgcattagc
caaattgacgatcgtgagattttcaagatctgtctggagtactggacaagactagtccag
gagctatatgaagaaatgcagcaactcccaataacggatatcaaccctttagttagcatg
ggtgtgagcggtttgtcaaatggaggggctcctaatcctagcactcttgccaattatcct
cttcgcaaacataaatacgccgaggtcttgtcgagtctcagaactgtgatgattgaaaag
atggtgcggccggaagaagtgttaattgtcgagaatgatgaaggcgaaatcgttcgcgaa
ttcgtcaaggagagtgatacgatccagctatataaaactacaagggaatgtttggtatat
cttacgcatcttgatgttgtcgatacagagaatatcatggcagacaagctagccaagcaa
gttgatgggaccgagtggtcatgggcgaactgcaacactttatgttgggccattgggtcg
atatctggagcaatgaatgaagaaacagaaaagagattcctcgtcaccgttattaaagat
ctccttggactcaccgaaatgaagcgcgggaaagataacaaagcagtggtggcgagtaac
atcatgtacatcgtcggacagtatcccagatttttgaaagcacactggaagttcttgaaa
acggtggttaacaagcttttcgaattcatgcatgaaactcatgaaggcgtccaggatatg
gcctgtgatacatttattaaaattgccaacaaatgtaaaaggcattttgttgtgcaccag
cccggcgaggcagagcccttcatcgacgaaattattggatcaatgagcaagattacctgc
gacttgtcccctcagcaaattcacactttctatgaagcttgcggctatatgatttccgcc
cagggtcaaaagtcaatacaggatcggttgattgaaaacttgatgtcattaccaaatgcc
gcgtgggatagcattataaatcgggcgaaccaggatcctgcaactttgcaagatggggag
acgattaaagttgtaggtaacatcatgaaaacgaatgtcgctgcgtgttcctcgatcggg
agttatttctattcccaaataggccgtatttatcatgatatgctgaacatgtaccgggct
tccagtcaactgattaacgatgcggttgcgagagatggcaagtga
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