Coccidioides posadasii: 9695859
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Entry
9695859 CDS
T01332
Symbol
TFB3, D8B26_004543
Name
(RefSeq) TFIIH/NER complex subunit
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
cpw
Coccidioides posadasii
Pathway
cpw03022
Basal transcription factors
cpw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
9695859 (TFB3)
09124 Replication and repair
03420 Nucleotide excision repair
9695859 (TFB3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpw03021
]
9695859 (TFB3)
03400 DNA repair and recombination proteins [BR:
cpw03400
]
9695859 (TFB3)
Transcription machinery [BR:
cpw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
9695859 (TFB3)
DNA repair and recombination proteins [BR:
cpw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
9695859 (TFB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-C3HC4
zf-C3HC4_2
zf-RING_2
TRAF3_RING
zf-RING_16
zf-RING_4
DUF3797
Motif
Other DBs
NCBI-GeneID:
9695859
NCBI-ProteinID:
XP_003070369
UniProt:
C5P3F6
LinkDB
All DBs
Position
2:complement(join(6524395..6525295,6525373..6525613,6525675..6525720))
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AA seq
395 aa
AA seq
DB search
MPSQLNGASRHGEDDEVCPVCKSSRYLNPDMLFLINPECYHKMCESCVDRIFSAGPAPCP
VAGCHKTLRKNRFRKQTFEDIGVEREVDIRKRVMGILNRREEEFDSKRAWDDFLEQREEI
ITNLVYGTDVAKTEAQLAEYAAQNAASIRHNKTLESQESAFLLQQQTLEQEAFRQRRQAA
RQDYDEARRAKLAGRQEIITRLATGTPEDAEAIAREAKHGGLLKKSSARRSEEERIKRKQ
AALLAESRKAGAQAPPAGDTGATPAAGPCLIKGLRKIKTPEPEKPYDPFAGGLSLTNHDY
YTLKDHYPSPYLDPIRDDVRMLAGGYNLKEYYARTLLEAFAGLGCFIEEEISAKDPPSAS
IGPSSLSSESHSALATGKAAEEGIHRPTISSDDVF
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgccttcccaactgaatggcgccagccgccatggcgaagacgacgaagtatgtcccgtc
tgcaagtcctcacgttatctcaacccggacatgctgtttctcatcaatccggaatgctac
cataagatgtgcgagtcatgcgtggatcgaatattctccgccggccctgcaccgtgtccc
gtagcgggatgccataagacccttcgcaaaaatcggtttcgaaagcagacatttgaagat
ataggtgtcgagcgggaggttgatataagaaagagggtgatgggaatcttaaaccgccgc
gaggaggagttcgatagtaaacgcgcctgggatgacttccttgagcagcgtgaggagatc
ataaccaacctcgtctacggtacagacgtcgcaaagacagaagctcaacttgctgaatac
gctgcccaaaatgccgcttcaatccgtcacaacaagactctcgaatctcaagaatccgct
tttctccttcaacagcaaaccctcgagcaagaagcttttcgacaacgccgtcaagccgca
aggcaggactacgatgaagcacggcgagccaaacttgcaggacgacaagagatcatcaca
cgcctcgccactggcacccccgaggacgcagaggcaatcgcgcgcgaagccaaacatgga
ggcttattgaagaaatcatccgctagacgtagcgaagaagagcgcatcaagcgcaaacag
gctgccctgctggcggaatctagaaaggcgggtgctcaagctccacctgcgggagacact
ggtgccaccccggccgcgggtccgtgcttgatcaaaggcctcagaaaaatcaagactcca
gaacctgagaagccatacgatcctttcgccggtggattatctcttactaatcacgactac
tacacactaaaagatcactatccatctccgtaccttgacccgataagggatgatgttcgg
atgcttgccggaggatataacctcaaagaatattacgccagaacccttcttgaagcattt
gcgggtttggggtgctttattgaggaggaaatctcagcaaaagatccgccatctgcgtca
atcgggccctcgtcgctctcgtccgaaagtcattcagctttggcaactggtaaagctgca
gaggagggcattcataggcctacaatatccagcgacgacgttttttaa
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