Coccidioides posadasii: 9695965
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Entry
9695965 CDS
T01332
Symbol
D8B26_004655
Name
(RefSeq) uncharacterized protein
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
cpw
Coccidioides posadasii
Pathway
cpw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
9695965 (D8B26_004655)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpw03019
]
9695965 (D8B26_004655)
03012 Translation factors [BR:
cpw03012
]
9695965 (D8B26_004655)
Enzymes [BR:
cpw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
9695965 (D8B26_004655)
Messenger RNA biogenesis [BR:
cpw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
9695965 (D8B26_004655)
Translation factors [BR:
cpw03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
9695965 (D8B26_004655)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MADF_DNA_bdg
HA2_N
OB_NTP_bind
AAA_29
Motif
Other DBs
NCBI-GeneID:
9695965
NCBI-ProteinID:
XP_003070470
UniProt:
C5P3Q7
LinkDB
All DBs
Position
2:join(6845345..6845377,6845444..6845953,6846018..6849416,6849478..6849780)
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AA seq
1414 aa
AA seq
DB search
MLKLGEMQTAVRRLHRCPRRCPTPWRSMRSPDSIPATRSLAVSSARRSLRSGLIPVSKGH
WSSKHLLNRKYSAVSKGVFNDDVTADMLREFHPAHDQRLKWAEASNGVETPIGFANVDDY
PALKGIEADPVRIRELLESAVSAEFQMEFRALGPVDVMCLVTCSIPLLRTVIKVSGKGDS
EANAKHVAFTYLVSELHNRRLLKAIFDHKASLADLKGIYDYAARFLCVPIFQFRMVRDSL
QSDGYNFEVTISLEEQSLSVTTTANSFDEAVKRAIHDFNKKRAIFSVINSTKQTCSDSIA
AWEVEGFIDFYEFSKSLRNCVRVKVDKQPISPEKSAYIASIYVRNELIPEPVIAFEDRQV
RKIANLAAAITLIRQDPSLWDVYYRKYARRRKKLSMNRNVVEEMKFLSKNLNYSRRKMVD
RVQNIEPSNLKGELRFGNVLHSDLEQRSHQLRDHLSWLEEQQSPHPRTLSRRLPVYRYKT
DIIRMVDQNDYSFITGAFGSGKSTQVPQILFDHAIMQGTGALCNIFVSKDRLSTVKGNAG
RVALERSQTLGSTVGYGDSFGPKLPTLAGSISYYTHEMLLDLLSDESNGIFETASHVIID
DVEKRTISTDLLLAYVKSKVSERANQGKPVPKLIVMGLDFDVELFASYFRVQPSREDFAC
PSVRIQTNDHPADKVYLNSILEQLRSVRGYHSLLAEPQTARYLSLENIEVARPLPYEEGL
RMSEENSPINGEQDIIPGSLWEEGLRLNDDNSHISGEQESIPDSWWEEVLQTSKENLFIN
EGQEIMRDSWWEDGLQLSEDNSPVNGEQDIVPHLQEEVPPTPIGLVAAAIDHIAQTTETG
AILALLPDQDDIERVNQLLVRMIENDTSNRGKYRIFKHSPDKSGGSSADDRTSRTIILST
GTAGFSLAESVCFVVDAGLMTEKLHHPRSSTTSQVRRWIYKSWLQDRVMLASHKENGKYY
ALFSKEREASLQPHSTPHIRRLEFDRACLHAKVLFPSSGSISDILSGLIEPPSREHIFEM
TRKLQALNLIDQWDRLTPLGRIVSSLPLSPTAGKLVVLGVIFRCLEPLLISAAAVDLTSD
KASIFDRRRAHTESAQGPFFQFIRDSVSDHIGVINAFKYTNEQWNKHGESKAQLACRSKF
IRYPMFLKIWESVLRVEEMLFDAGIIPNPSRSNVIGGHALNMNSTSQSLIKSLLLRALLP
NIAEREQRGIWNTATTSEIQALPGTALRNISLRVNGVAIFSSLLTSGRSGNVYLDTATLI
PSMMACLFAENLKQNENMLYLYPWLQYSLPEDHPFDIRQSSSRVFSTCKSFLDEFINLAV
KDLAAYKLRRAVCFYRGGLKGESRDVSPKRRRLLYRFPYMNDRVSKTFVSALHKVFDGSM
GAVRGDTRVAPRWPSGDISKDPATNSETDCCIDF
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaactgggcgagatgcaaacggctgtgcgccgcctgcatcgttgtcctcgaaga
tgtccgaccccatggcgttcgatgcgttctccagactctattcccgccacacgttccctc
gcagtgagttcggccagacgcagcttgcggtcgggactcattccggtttcaaagggacat
tggagctccaaacatttgttgaaccggaagtatagtgctgtatcgaaaggtgtatttaat
gatgatgtcaccgcggacatgcttcgcgaattccacccggcgcatgatcaacgcttgaaa
tgggcagaggcttccaacggagtggaaacccccattggattcgcaaatgtcgacgattat
cctgccctaaagggtatcgaagctgacccagttcgcattcgtgaactactggaatcggct
gtcagcgcggagttccaaatggaatttcgggcgcttgggcctgttgatgttatgtgcttg
gttacgtgttccataccgcttcttcgcacagtgatcaaagtttctggaaaaggggactca
gaggcgaatgcaaaacatgtcgcatttacatatttagtctcagaactccacaatcgtcgt
cttctgaaagccatattcgatcataaggccagcctagctgacttgaaaggaatatacgat
tatgctgcccgtttcctatgcgttcctatatttcaatttagaatggtgcgtgactctttg
caaagcgacggctacaactttgaagttacgatttcgctcgaggaacaatctttaagtgtc
accaccaccgccaactcgtttgatgaagcagtaaaacgggcaatccatgatttcaacaag
aaaagggcaattttctctgtgataaacagcacgaagcaaacttgcagtgattcgattgct
gcgtgggaagttgagggctttattgacttctacgaattctccaaaagcttacggaactgc
gttcgtgtcaaagtggataagcaacccattagtcctgagaaatctgcgtacattgcctca
atatatgttcgaaatgagcttatccctgagcctgttattgcttttgaggacagacaggtc
cgtaaaattgcaaatttagccgcggcgattacacttatccgtcaagatccgagtctttgg
gatgtgtattaccgaaaatacgcaagaagacgaaagaagctttcaatgaatcggaatgtt
gtcgaggaaatgaagtttctgtcgaagaatctgaattattcccggcgcaagatggttgac
agggtacaaaatattgaaccaagtaatctgaaaggagaactccgctttggtaacgttctt
cattccgatctcgagcagaggtcacaccaacttagggatcacctttcttggctggaggaa
caacaaagccctcatccccgtactctgtcgcggaggctacctgtttatcgctacaaaaca
gatatcattcggatggtagaccaaaatgactatagctttatcacgggcgcctttggaagc
ggaaagtctactcaggttccgcagatcctttttgatcacgctataatgcagggaacagga
gctttgtgtaatatctttgtctctaaggatagactatccaccgtgaaaggaaatgctggg
cgagttgccttggagcgttctcaaacactgggcagcacagtcggatacggtgactcattt
ggccctaagctcccaacgctagctggcagcatctcatactacacgcatgaaatgcttttg
gatctgctaagcgatgaatcgaatggaatttttgagactgcttctcatgtgatcatagac
gatgttgagaagcgaactatctcaaccgatcttctactagcgtacgtgaagtcgaaagtc
tcggagagagcaaatcaaggaaagccagttcctaaattgatcgttatgggcttggatttt
gacgttgagttattcgcgagttattttcgggtccaaccatctagggaggactttgcttgt
ccgtctgtccgtattcaaaccaatgatcatccggccgataaggtttacttgaatagcata
ctggagcagttgcgttcggttcgtggctatcattctttattagctgagcctcagaccgct
cgatatctgtcccttgagaatattgaagttgcgcggccattaccatatgaagagggcctt
cggatgagtgaagagaactcacctattaatggagaacaagatattatacctggctctttg
tgggaagagggtctccggctaaatgatgacaattcgcatatcagtggagaacaggagagt
ataccagactcttggtgggaggaggttcttcagacgagcaaggaaaacctgtttatcaat
gaaggacaagagatcatgcgtgactcttggtgggaagatggtctccaactaagtgaggac
aattctcctgtcaatggagagcaagatattgtacctcaccttcaggaagaggttccccca
acccctattggattggtggcagctgctattgaccacatcgcccaaactacagaaacgggt
gcaattctagcccttcttccggatcaagatgatattgaacgtgtgaatcagttgctggtc
aggatgatagagaacgatacgagcaataggggtaaataccgaatattcaagcattctccc
gacaaaagtggtggatcctccgcagatgatcggaccagtcgaacgatcattctttcaact
ggcacggctggtttttcccttgccgaaagtgtctgttttgtagtggatgccggtctcatg
acggaaaaattgcatcatccgaggagttcaaccacgtcacaggtccgccgctggatctat
aaatcttggctacaagaccgagtgatgcttgcaagccacaaagaaaatgggaaatactat
gccctgttcagcaaggagagagaagcatcgttacagccgcattcaacccctcatatccgt
cgcctcgagtttgatcgggcgtgtctacatgcaaaagtcctcttcccttcgagtggatct
atatctgatattctatcgggattaatagagccaccatcgcgagagcacatctttgaaatg
actcgtaaacttcaggcattgaatctcattgaccaatgggacaggttgactccattaggg
cgaattgtttcatcgcttccactatcgcccacagcgggcaaactagttgttctaggtgtc
atatttcgctgtcttgagcccttactcatatctgctgctgctgtggatttgacctccgat
aaggcgtctattttcgaccgccgacgtgcccacactgaatcggcccaaggtccatttttt
caattcatcagggatagcgtcagtgaccacattggcgtcatcaatgcattcaagtacacc
aatgagcaatggaataagcatggcgaatccaaggctcaacttgcctgcagatccaaattc
attagataccccatgtttttgaagatatgggagtccgtcctccgggtggaagagatgctt
ttcgatgcgggaattatccccaacccttctcgaagcaacgtgattggcggacacgcattg
aatatgaattccacttcgcagtctctcataaaaagccttctactgcgtgcgttgcttcca
aacatcgcagagagggagcaaaggggtatatggaacacagcaacaacaagtgaaatacaa
gccctgccaggaacggctcttcggaatataagcctgagggtcaacggcgtcgccatattc
tcatcgctcctaacgtcgggccggtctggaaatgtatatcttgacactgcaacgttgatt
ccatcaatgatggcctgtttgtttgcggaaaacctgaaacagaatgagaatatgttgtac
ttatacccatggctgcagtatagcttgcccgaagatcatccgttcgacatcaggcagagt
tctagtcgagtattttcgacgtgcaaatcattcttggacgaatttatcaacttggctgtc
aaggaccttgcggcttacaagctacggagagccgtctgcttctatcggggtgggttgaaa
ggtgaatcacgagacgtgtccccgaaaaggcgcagactcctgtaccggtttccttatatg
aatgatagggtgtccaagacttttgtcagcgcccttcataaggtattcgacggaagcatg
ggcgcggtgagaggagacacacgggtggcgccgcgttggccatcgggtgatatctcgaaa
gatcctgctacgaattcggaaaccgactgctgcatagatttttga
DBGET
integrated database retrieval system
