Coccidioides posadasii: 9696009
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Entry
9696009 CDS
T01332
Symbol
D8B26_004703
Name
(RefSeq) uncharacterized protein
KO
K12878
THO complex subunit 1
Organism
cpw
Coccidioides posadasii
Pathway
cpw03013
Nucleocytoplasmic transport
cpw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
9696009 (D8B26_004703)
09122 Translation
03013 Nucleocytoplasmic transport
9696009 (D8B26_004703)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpw03019
]
9696009 (D8B26_004703)
03041 Spliceosome [BR:
cpw03041
]
9696009 (D8B26_004703)
Messenger RNA biogenesis [BR:
cpw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
9696009 (D8B26_004703)
Spliceosome [BR:
cpw03041
]
Complex C
Other components
EJC/TREX
9696009 (D8B26_004703)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
9696009 (D8B26_004703)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
HCMVantigenic_N
Motif
Other DBs
NCBI-GeneID:
9696009
NCBI-ProteinID:
XP_003070514
UniProt:
A0ACG8D8W2
LinkDB
All DBs
Position
2:join(6998327..6998566,6998628..6998706,6998762..6998880,6998940..6999611,6999672..6999821,6999875..7000188,7000247..7000568)
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AA seq
631 aa
AA seq
DB search
MAVGDIRAVQIYRRRVQVLLDRATKVKQGSEIEPSITESDLGDAINEVDDGEEEALKNQS
SQPAYAAVETAFREKFYHLLATTSINKPEFVHMWNLLDVVSIFSDNERCEPGLIFWLIEE
LLDSQTIDGCRKVFDYLESRRERNTAKHFKQKSLIILRSCNELLRRLSRAEDTVFCGRVF
IFLFQSFPLGDKSSVNLRGEYHTENVTTFDEPPKHIAANEDADDVEMKDAEAQKPSDNSS
KTDAAASSQGGSVSPEIDGQRSKQSTDHQAEDTSIDMDALYPVFWGLQANFSAPTRLFDH
EHFASFKKGLESTISSFQKVSIDLEKRGMTKGSEETSRRGLKRKRGETGPETANTFNPKY
LTSRDLFELEVNDVAFRRHILVQSLILLDFLISLSPKAKAKLADATNKSVLYGYVLSDED
AKWANQMKSSIASYLQQGLDGKFYYRMVDTVLTRDKNWARWKAEGCPPIEKPPIQIQDYL
DTQSSTTKLTTNKRLRATPLGSLDLKFLSEEANLGNLDRLMEPDRFRNPGAESYMRGITD
DEFNLDMAQNSDEKEEAAKAKASKIWRVLRLSSRSKLNRFDKIEDGRNLKILFENPPPPE
KAVAEAEDGADGHKDDSVKNPPTKENDAVTE
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcggggacattcgcgctgttcagatctatcgaagacgtgttcaggtactgctg
gacagagcgacgaaagtgaagcagggctccgaaatagaaccgtcgataacagagtctgat
ttgggagatgcaatcaacgaagttgatgacggcgaagaagaggcattaaagaaccagagt
tcccagccggcctatgcagcagtagagacagctttccgcgagaagttttatcacttactg
gccacgacgtctatcaacaagcccgagtttgttcacatgtggaatctacttgatgttgtg
tctatattctccgacaatgagcgatgcgaacccggtcttattttctggctcatagaggag
ctactcgatagtcaaaccatcgacggctgccgtaaagtgttcgactatttagaatccagg
cgggaacgtaatacggctaaacatttcaagcagaagagcttaattattctccgttcatgc
aatgaattgctgcgacgactctcacgagcggaagatacggtattctgcggacgggtgttc
atttttctctttcaatcatttcctttgggagacaagagctcggttaatttgcgaggagaa
tatcatacagaaaacgttacaacatttgacgaaccgccaaaacacatcgctgccaatgaa
gacgccgacgatgtagagatgaaagatgcagaagcgcaaaagccttcagacaactcatca
aaaacggacgcagcagcttcttctcaaggaggttctgtctcccccgaaatcgatggtcag
cgatcaaagcaatcgaccgatcaccaagctgaagatacatcgattgatatggacgcttta
tatccggtattctggggattacaagcgaacttttcggctcctacacggctttttgatcac
gagcattttgcttctttcaaaaaggggctcgaatccaccatttcaagtttccaaaaggtt
agcattgacttggaaaagcgcggcatgacaaagggctcagaagaaacatcacggcgtggg
ctgaagcggaagcggggtgaaaccgggcctgaaaccgcaaatacattcaacccaaaatat
ctcacgagccgggacttgttcgaattagaggttaacgacgtcgcatttcgaagacatata
cttgtccagtcgcttattcttctcgatttcctaatttctctctcaccgaaggcgaaagcc
aaacttgcggatgctacaaataaatcagttctctatggctatgtgcttagcgacgaagat
gcgaaatgggcaaatcaaatgaagtcctccatcgcgagctacctgcagcaaggtctcgat
gggaagttctattatcgcatggtagacaccgtcctgacgagagataaaaactgggcccgt
tggaaggccgaaggatgcccacctattgagaaacccccaattcaaattcaagactatcta
gatacccagtcctctactaccaaattaactacaaataaacggctccgggcgacgccactc
ggctccttggaccttaaattcttgtcggaagaagcaaatttaggcaatcttgatcgcctc
atggagcctgacaggtttagaaatccaggggccgagtcatacatgcggggtatcacggac
gatgaattcaatctcgacatggctcaaaacagtgacgaaaaagaagaagctgcaaaagca
aaagcaagcaagatatggagagtcttacggctgtcctcgcgcagcaagttgaatcggttc
gataaaatcgaagacggcagaaatttgaagatcctttttgaaaatccgcctcctccggag
aaggcggttgcggaagcggaagatggagctgatggtcataaagacgactcagtaaagaat
ccgccaaccaaggagaatgatgctgttacggagtga
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