Coccidioides posadasii: 9696243
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Entry
9696243 CDS
T01332
Symbol
D8B26_001127
Name
(RefSeq) uncharacterized protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cpw
Coccidioides posadasii
Pathway
cpw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
9696243 (D8B26_001127)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpw03041
]
9696243 (D8B26_001127)
Spliceosome [BR:
cpw03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
9696243 (D8B26_001127)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
Beta-prop_THOC3
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WDR55
Beta-prop_EML_2
EIF3I
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
PRP4
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_EML
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Tricorn_2nd
Beta-prop_RIG_2nd
Nop53
WD40_like
Ribosomal_60s
CCD97-like_C
Motif
Other DBs
NCBI-GeneID:
9696243
NCBI-ProteinID:
XP_003070749
UniProt:
C5P2R6
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Position
1:join(3878024..3878102,3878191..3879737)
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AA seq
541 aa
AA seq
DB search
MNSSRRAYVEDATEDSDMDGVDLANIPVDRDYELPAATAGIAPEKASAILSQFSRKRRAA
AIPVPTDDGRVRSRLRELGHPITLFGEDATDRRDRLRGLLLELEEQQEAAAAAAGEEGTD
VQMQEAEEEAEEEQEHEEEFYTEGTQGLLEARKNIAKFSLPRAKTRIERQKEESTIPLRT
HIKHRKAIKEKLQSFDLFGSQLAGDRPVSITRFAPNGEFLATGNWGGSIKLLSIPNLEES
ATLRGHTDRIGGISWFPGATLASSNVSEDSVNLASGGGEGNIHLWSLNKDTPLSTLSGHS
GRVCRVEFHPSGEYLASASFDTTWRLWDVRTSTELLLQEGHSREVFSLAFNPDGSLLASG
GLDSIGRIWDLRTGRTVMILEGHIREIYALDWGIDSYRVLSGSGDGWVKCWDIRQVRGTG
GVGAHKGVVSDLRWYKGTEDTSSYLPTLSQGELNVEMTDGPTSANGERTARQPIQPRKSG
TFFVTAGFDKNVNVFSADDWSLVKSLSGHSGNVLSVDVSDDVKWIASCGHDRTVKLWGIE
G
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgtcgcggagggcgtatgtggaggacgcgacagaggactctgatatggacggg
gtagatctagcaaatattcctgttgatcgcgattatgagttgcccgcggccactgctggg
atagcgccggagaaagcgtccgcgatcctatctcagttctcacggaaacgaagagccgcc
gcgatcccggtgccgacagacgatggacgggttcgttcacgactacgcgagcttggacat
cctataactctctttggtgaagatgctacagaccgacgcgaccggttgagaggtttactg
cttgaactcgaagagcagcaggaagcggcggccgccgccgccggggaagagggaacggat
gtgcagatgcaagaggctgaggaagaagctgaagaagaacaggaacacgaagaggaattc
tacaccgaaggcactcaaggcttgcttgaggcgcggaaaaatatcgccaagttctcttta
ccgcgggccaaaacgagaatagaacgccaaaaggaggaatcaacgataccgctacggacg
cacattaagcacagaaaggcaatcaaagaaaagttacagagttttgacttgttcggctct
cagttggcaggagaccgcccggtgagcatcacacggttcgcgcccaatggggaatttttg
gcaaccgggaactggggcgggagcattaaactgctctctattccaaatctagaagaaagc
gccacgcttcgcggacatacggatcgaattggaggcatttcgtggttcccaggtgcgacc
ctcgcttcctcaaacgtatcagaagactccgtgaatcttgcatcgggtggcggcgaagga
aatatacatctatggtctctaaataaagacacccctctatcaacgctatctgggcattct
ggacgcgtctgccgtgttgagtttcacccttccggggagtatttggcgtctgcgtccttc
gatactacctggcgactgtgggacgtaaggacaagcacggaattactcttgcaagaaggc
cactctcgcgaagtgttttcactagcattcaatcctgacggctctcttcttgccagtggt
ggtttggatagtatcggccgtatctgggatttgcggaccggccgaacagtaatgatcctc
gagggccacattcgcgaaatatatgctctggactggggaattgactcatatcgggtcctt
tctggctcaggtgacggctgggttaaatgctgggatatccggcaagttcgtggaacgggc
ggtgtgggcgctcacaagggggtggtatctgatttgagatggtataaaggcacagaggac
acatcgtcttacctacctacgctctcacagggagagctgaacgtggagatgaccgacggc
ccgacctctgcgaacggggagcggacagcacgacagccaatccaaccaaggaaatcgggg
acctttttcgttaccgccggatttgataagaatgttaacgtcttcagtgccgatgattgg
tctttggtgaagtcactcagcggtcattctgggaacgtactcagcgtagatgtgagcgac
gatgttaagtggattgcaagctgtgggcatgatcgcacggtcaagctatggggcattgaa
ggctga
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