Coccidioides posadasii: 9696660
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Entry
9696660 CDS
T01332
Symbol
RFC4, D8B26_000764
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
cpw
Coccidioides posadasii
Pathway
cpw03030
DNA replication
cpw03410
Base excision repair
cpw03420
Nucleotide excision repair
cpw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
9696660 (RFC4)
03410 Base excision repair
9696660 (RFC4)
03420 Nucleotide excision repair
9696660 (RFC4)
03430 Mismatch repair
9696660 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpw03032
]
9696660 (RFC4)
03036 Chromosome and associated proteins [BR:
cpw03036
]
9696660 (RFC4)
03400 DNA repair and recombination proteins [BR:
cpw03400
]
9696660 (RFC4)
DNA replication proteins [BR:
cpw03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
9696660 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
9696660 (RFC4)
Chromosome and associated proteins [BR:
cpw03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
9696660 (RFC4)
DNA repair and recombination proteins [BR:
cpw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
9696660 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
9696660 (RFC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
AAA_lid_RFC1
DNA_pol3_delta2
AAA_14
Viral_helicase1
RuvB_N
RCF1-5-like_lid
nSTAND3
Gp44_lid
AAA_16
AAA_3
Mg_chelatase
DNAX_ATPase_lid
nSTAND_NTPase5
Rad17
AAA_assoc_2
AAA_11
AAA_19
MeaB
NTPase_1
AAA_18
NB-ARC
AAA_28
AAA_25
KTI12
Motif
Other DBs
NCBI-GeneID:
9696660
NCBI-ProteinID:
XP_065979403
LinkDB
All DBs
Position
1:complement(join(2754308..2754533,2754622..2755044,2755108..2755207,2755278..2755498,2755562..2755650))
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AA seq
352 aa
AA seq
DB search
MVQAESSNAAVKHALRANAAGAPPDYELPWVEKYRPVFLDDVVGNTETIERLKIIARDGN
MPHVIISGMPGIGKTTSILCLARQMLGDVYKEAVLELNASDERGIDVVRNRIKGFAQKKV
TLPPGKHKLVILDEADSMTSGAQQALRRTMEIYSATTRFAFACNQSNKIIEPLQSRCAIL
RYSRLTDAQIVKRLMQICEAEDVKHSDDGIAALVFSAEGDMRQAINNLQSTWAGFGFVSG
DNVFRVVDSPHPVKVQAMIKACYEGKVDSALDTLTELWDLGYSSHDIISTMFRVTKTIPS
LPEHSKLEFIKEIGFTHMRILEGLQTFVQLSGCVAKLCKINMKPELFKPPRP
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggttcaggcggaatcatccaatgcagcagtaaaacatgccctgcgcgcaaatgcggct
ggcgcgcccccagactatgagctaccctgggtcgaaaagtacagacctgtattcctcgat
gacgttgtcggaaatacggagacgatagagaggctaaaaataattgcccgcgatggaaat
atgcctcacgttatcatttccggcatgccgggaatcggaaagacgacatccatcttatgt
ttagcaaggcagatgctgggagatgtgtacaaagaggctgtgttagagctgaatgctagt
gacgaaagaggcattgacgtggtgagaaatcggataaaagggtttgcacagaagaaggtc
acattaccaccaggaaagcataagcttgttatccttgacgaggccgatagtatgacctct
ggtgcccaacaagccctccgtcgcacaatggaaatatactctgctactactcgatttgcc
tttgcatgcaaccagtctaacaagattattgagccactacagtcgcgttgtgcaatttta
cgctattctcgtttaacggatgcccagatcgtcaagagattaatgcaaatatgcgaagcg
gaggatgtgaagcattccgatgatgggattgcggcgctggtatttagcgcggagggcgac
atgcgtcaagcaatcaacaatctccagagcacctgggctggttttggttttgtgagcggc
gataatgtcttccgtgtggtcgatagtcctcatccagttaaggtccaagcaatgatcaaa
gcgtgctatgagggtaaggtcgattccgcgttggatacattgacagaattatgggatctg
ggatactcctcgcatgatattatttcaacgatgttccgagtcaccaaaacgattccttct
ttgccagaacattcaaaactcgagttcatcaaagagatcgggtttacgcatatgcgcatt
ctagaaggactacagactttcgtacagctgagcggctgcgtagcaaaattgtgcaaaatc
aacatgaaaccggagctttttaaaccaccaaggccttaa
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