Coccidioides posadasii: 9696762
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Entry
9696762 CDS
T01332
Symbol
RPB3, D8B26_000397
Name
(RefSeq) 45 kDa subunit of RNA polymerase II
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
cpw
Coccidioides posadasii
Pathway
cpw03020
RNA polymerase
cpw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
9696762 (RPB3)
09124 Replication and repair
03420 Nucleotide excision repair
9696762 (RPB3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpw03021
]
9696762 (RPB3)
03400 DNA repair and recombination proteins [BR:
cpw03400
]
9696762 (RPB3)
Transcription machinery [BR:
cpw03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
9696762 (RPB3)
DNA repair and recombination proteins [BR:
cpw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
9696762 (RPB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
9696762
NCBI-ProteinID:
XP_003071268
UniProt:
C5P0B5
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All DBs
Position
1:complement(join(1436942..1437353,1437415..1437983,1438104..1438160))
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AA seq
345 aa
AA seq
DB search
MDYDEMDIEPQGPQVTVREAEPHRVDFRLTSVDLAFANSLRRVMLTEVPTVAIDVVEIES
NTSVLPDEFIAHRLGLIPLHSKNCDVDMVYARECDCEGGCSRCVITLQLHAKCTGEGVMV
VYARDLVVVGDRANEWVGNPVINDPAGKGPIICKLRRGQEVKMTCTVKKGIAKEHAKWSP
TAAVGFEYDPHNNLKHVDYWYEEDPIKEWPISANAEWENPVPPDMPFDYDATPSTFYLDV
ESVGSLEPDAIVQQGISVLQRKLAEIISALTGTGEPNERGDGMNGVDIDGARSPDAYEPP
EGIDGGFSTYAPNGVGAGVGGQSVWGGAGGTTPYGATPYGQGYGF
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggattatgatgaaatggatattgagccccaggggccgcaggtcacagtgcgagaggct
gaaccacacagagtcgacttccgcctcacttccgtagatctcgcctttgccaactctctg
cgtcgcgtaatgctcaccgaagtacccacggtagccatcgacgtcgtcgaaatcgaatca
aacacctctgtcctgcccgatgaattcattgcccatcgtctcggcctcatccccctacac
tccaagaactgtgacgttgacatggtctacgcacgagaatgtgactgcgaaggcggctgt
tcacggtgcgtgattacgctgcagctacatgcaaaatgtacgggcgagggggttatggtg
gtatatgcgcgcgatctggtggtggttggggaccgcgcgaatgagtgggtagggaatccg
gtgatcaacgaccctgcggggaagggcccgataatttgcaagttaagaaggggacaggag
gtgaagatgacgtgtaccgtgaagaaggggattgcgaaggagcacgcgaaatggtcgccc
acggcagcggtgggatttgagtatgatccgcataataatttgaaacatgtggattattgg
tatgaagaggacccgatcaaggaatggccgatttctgccaacgccgaatgggagaaccct
gttccacctgatatgccgtttgactatgatgccacaccctcgactttctatctcgatgtt
gaaagcgtcggaagcctggaaccagacgccatcgtccagcaaggtatcagtgttctccag
cgaaagcttgcagaaattatatctgccttgactggcaccggagaacccaacgaacgtgga
gacggtatgaatggtgttgatatcgatggggcgcggagtccggacgcgtacgagccaccg
gaaggtattgatggcgggtttagcacttatgcaccaaatggcgttggagccggtgtagga
ggtcagagtgtatggggcggtgctggcggcacaactccatatggagcgacgccatacggc
caaggctatggattctag
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