Coccidioides posadasii: 9696935
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Entry
9696935 CDS
T01332
Symbol
TFC4, D8B26_008019
Name
(RefSeq) transcription factor TFIIIC subunit tfc4
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
cpw
Coccidioides posadasii
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpw03021
]
9696935 (TFC4)
Transcription machinery [BR:
cpw03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
9696935 (TFC4)
TFIIIC, fungi type
9696935 (TFC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_14
TPR_16
TPR_11
TPR_2
TPR_17
TPR_CcmH_CycH
TPR_1
TPR_8
ANAPC3
TPR_9
BTAD
TPR_Slam
ARM_TT21_N
ChAPs
ARM_TT21_2nd
Motif
Other DBs
NCBI-GeneID:
9696935
NCBI-ProteinID:
XP_003071441
UniProt:
C5P0T8
LinkDB
All DBs
Position
5:complement(join(161379..162220,162287..162496,162550..163414,163469..164501,164571..164731))
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AA seq
1036 aa
AA seq
DB search
MDEDSVSDRSESEEPGYSNEYDEFGRVKRRKLFDPDDFDSDDADLQQPSSDESSDAEPYE
ANQFIDDEAVFSSINRMDRRHRRQHDSDSFGGRPGKGVKRGPRKPLEPSAEFKELHSAAT
SAFIDSDYDRAIVLVKQAIQINPEMFAAHSLLSEIFLAQGQKDKALAALFSGAHTRPKDP
TVWLKVAKMILDHAGDDRTAALQDVIYCYSRVIDVDAANYDVRFERAAMYRDLGHKGKAA
QEYERLLKDLPHNTRALRHLAETYIDINEVSKAMSRYDESIAYYSSLSPQEATDFDWSDV
NIYVELFGYQRNYWEGLRALRSLSRWLLGRKDDVEWDSIWEDDREWDAEDYPRRISTPWF
SPSRYPVESYGVGLPLELRIKLGIYRLKMGPEFKDEAMSHFVWLAPEETAPGSRLYDYGD
LFRETADALKEAKFYPEALLFYTPLQYTQEFADTSLFMAMADCHLACKNDSDAESCLLTV
VEYDQTNIDARVKLAKFYESMGMMEQALKYVTEAVELGRQESVPMRRRRGNFGARIEQLA
KEFRSMESSISDHGEMELEPSRSPDHMNGPISFTGPAPIPSSKEVRPEDRIASAIQNAEH
VRYLYKKSLELRPSMRIGEEDATEDWLDIVDALLRSFRSNRVFFPLQKGMMFVGYSKEAH
RKAGRLKGPDIMDEVQELAARIQAALGTAEFDPDSIPMDYHGISFDAWLDLFLEYALVLA
GQGHAEEAYDSLAAAADANIWYHSKPCTRRIYVCWFTCAIRLQDEDVLASIARWFMKEYQ
FVTDTYRLFATLSRVCGDPRKSLFHSSPSMKFMLRQVKAIDYSLTEDPSSTTTDPRPTFF
AERASLTTKDESGNLIPAEDMDVSLLVLYGHILYAGNSFTNALNYFLRAYALDPENPAVL
LSIGLSYIHHSLKRQSDNRHYLIMQGLSFMQEYRRVRENSSVPQERQEVEFNFARVWHML
GLAHLAVRGYERCLELSGEIQAEKQKEQLQKVDDKNRDGACAEDYAREAAYALQCLYSLG
GEVEMAKKITEKWLVI
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagacagtgtctccgacagatcggagagcgaagaaccaggctatagcaatgaa
tatgatgaatttggccgcgtgaaacgccgaaagctctttgatccagatgatttcgattct
gacgatgccgatttgcagcagccttcgtcggacgaatcctccgacgctgagccgtacgaa
gcaaatcagttcattgatgatgaggctgtcttctcatccatcaatcggatggatagaagg
catcgtcgacaacatgactccgatagcttcggcggccgaccggggaagggggttaagcgt
ggtccaaggaagccactggagccaagcgcagagttcaaagaattgcattccgccgctaca
tcggcgtttatcgactctgattacgaccgagccatcgttcttgtaaaacaggccattcaa
atcaacccggaaatgttcgcggctcattctttgctatctgagatctttctcgctcagggt
cagaaagacaaagcgttagcagcactatttagcggagcccataccagaccgaaggatcca
acggtgtggctaaaggtcgctaaaatgattttggatcatgctggtgatgacagaacagcg
gccctgcaggacgtgatctactgctatagtcgcgtgattgatgtcgatgcggcgaactat
gatgtacgctttgaaagggctgccatgtatcgcgacttaggtcacaaggggaaagccgcc
caagaatatgaaaggcttctcaaggatctccctcacaatacaagagctttgcggcatctt
gccgagacttatattgatataaacgaagtttcaaaagccatgtctcgatatgatgaaagt
atcgcctactactcctccctgagtccccaagaggctaccgattttgactggtcagacgtc
aatatctatgtggaactttttgggtatcagcggaactactgggaaggtctgagggccctt
agatctctctccagatggctacttgggagaaaagatgacgtggaatgggattcaatatgg
gaagacgaccgggaatgggatgccgaggattaccctcgtcgcatcagtaccccatggttc
tctccttcaaggtatcccgtggaatcgtacggtgttgggcttccactcgagcttcgtatc
aagctgggtatttatcgactgaaaatgggacctgaatttaaggacgaagcaatgtctcat
tttgtctggctagcaccagaagagacggctcctggttcgagattgtatgattatggggat
ctttttcgagaaaccgcggacgcattgaaggaggctaaattttatcctgaagcgctgcta
ttctatacacctcttcagtacacccaagaatttgcagatacgagcctttttatggcgatg
gcggactgccacctggcctgcaaaaacgactctgatgcagagagctgtctcctcacggta
gtcgaatatgatcaaaccaatattgatgcaagggtaaaattagcgaaattttacgagagt
atgggcatgatggagcaagccctcaaatatgtgacagaagcagtcgaacttgggcgtcag
gagtcggtaccgatgcggagacggaggggaaattttggcgcgaggatcgagcagctcgca
aaagaattccgctccatggaatctagtatcagtgaccatggagagatggaattggaaccc
tccaggtcaccggaccatatgaacggtcccatatcattcaccggcccagcgcccattcca
agttcgaaggaagttaggccagaggatagaatcgcgtccgcgatccagaatgcagagcat
gtacgctacttatataaaaagtcattggagcttcgaccttccatgagaattggagaggag
gatgcgacggaagattggttggacattgtggatgctcttttaagaagtttccgatcaaat
cgagtgttctttcctttgcaaaaaggaatgatgttcgttggatattcgaaggaagctcat
cgcaaagctgggcgcctaaaaggacccgatatcatggatgaggtccaggagttagcagcc
agaattcaggcagccttaggaacggccgagttcgaccccgattcaattccgatggattat
cacggaatatcctttgatgcttggcttgatctcttcctggaatacgcgcttgttctagct
ggtcaagggcatgcggaagaagcatatgattctctagcagcggcggctgatgcaaacatc
tggtatcattcgaaaccctgcacacgccggatttatgtttgctggttcacttgtgcaatt
cgactccaggatgaagacgttctcgcaagcatcgccaggtggtttatgaaagaatatcag
ttcgtcaccgacacataccgcctattcgcgactctcagccgtgtctgtggcgacccgaga
aagtccctattccactcttccccgagcatgaaattcatgctgcgtcaagtgaaagccatt
gactattccctcactgaagatccttcatccaccaccaccgatcctcgcccaacgttcttc
gccgagcgtgctagtctcacaacaaaagatgagtccggaaatctcatacccgccgaagac
atggacgtctctctactcgtgctatacggtcacattctctacgcaggaaacagcttcact
aatgcgctcaactactttttgcgcgcatacgctcttgatccagagaatccggcggtcctg
ctgtccatagggctgagttatatccatcactcgctaaaacgacagtccgacaataggcac
tacctgatcatgcaagggctctcgtttatgcaagaatatcggagggtaagggagaatagt
agtgttccgcaggagagacaagaagtcgagttcaatttcgcgagggtatggcatatgctg
ggtctcgcgcacttggcggttagaggctatgaaagatgcctcgagttgagtggggagatc
caagccgagaagcagaaggagcagctgcagaaggtggatgataagaatagggacggtgct
tgtgcggaagattatgcacgtgaggcagcgtatgccttgcaatgtctttattcgcttggt
ggggaggtggagatggcgaagaagatcacagagaaatggctcgttatttga
DBGET
integrated database retrieval system
