Coccidioides posadasii: 9697180
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Entry
9697180 CDS
T01332
Symbol
RTC1, D8B26_003901
Name
(RefSeq) SEA (Seh1-associated) complex subunit
KO
K20408
SEA/GATOR complex protein SEA2/WDR24
Organism
cpw
Coccidioides posadasii
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpw04131
]
9697180 (RTC1)
Membrane trafficking [BR:
cpw04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
9697180 (RTC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
WD40_RFWD3
eIF2A
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
9697180
NCBI-ProteinID:
XP_003071686
UniProt:
C5P1I3
LinkDB
All DBs
Position
2:join(4472790..4473028,4473127..4475138,4475205..4477021)
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AA seq
1355 aa
AA seq
DB search
MMTDSPRNQGSAANAAPPPAPPLPPAPPPLPPQRYAIRATSAFARFAHPFFYGSRPPSPQ
QNSPRVTSTIPAGLKHSASTAGASPIVSHKTGIPIAALDVSPQRTHAILAGREILKTIRV
TPDHCSEEVNIRSAIIGYSATHNASPAALSSKHKEQLSARDVKWSNGEYDQVIATAATNG
RIAVFDLNRAGVELGRFHEHTRQVHRLAFNPHRGAWLLSGSQDATIRMWDLRVLSGTRGV
VNFGSKHRFNGHSEAVRDVRWSPADGVEFATATDSGAIQRWDVRKENAPLMKINAHEKPC
SAIDWHPDGKHLVSGSADRLIKVWDFSSTDRRQKPCFQLRTPQSLSNVRWRPASWTGDDA
DTGDWQSTQVVTAYDQEDPRIHLWDFRRPHLPFKEFDHYSRSATDMLWLSSELLWSVNSE
GVFTQADINHVPQVIQRRRPCAVAWSPSGDIAFAHQRARRCQPSTSYNLAEFLGHDYNSG
SNEKNASFTDDAVDEPPLVPHRKRPNRTAYSRLSKSLSGASSISEDEPPQVVSLEKAVAK
SGSYEPTETGMIGRISGVTLDQDIFTYLAQSYSSLLTSYFSQGASPTAIKLFLDSFDHNA
AQAERVGLYKLGRTWKIAKYVVSMELTARAKEQPMLEEKPSSQKDEQIGEKRPVNKEPLT
GKVSSRLFEGVAEAKGQALTAAELENGSDIATPLARPKCDVPVGKSGGDKEAGLRDDPPE
LAPLPPSVLGHNQWSKQAATQDEVPDNVRQMHEPAQKESLSGGNRSAPRAIARRADWRLQ
DEGALEPQDDRQKNDYDQIAEEKKTALREYKPISKDVLSLDTLSRGGTRPPQPMTYARHD
SAESFPMFSASTDSSHRAKSLADEAASPQRKQDTSDLGGSPWSAVGDSPLQTIPELQDNS
PSKGRERNESDASLSGMSFEDILPDLDSIHLERPAVPLPFIVQSSPISNYSEEEHSPRDQ
LALLDAQANPESNIAACEGAQSEITNFPLSVKSVSPPWSPQSMLREVVKYYSSNSTVDLV
SAVHFLHKLHILFRSLDDIIPYEERQSILQSYNEQLLRRKMFIEAAEVRLQCAPTYPAVY
DYAQKDSYINVYCFQCNKPYENSIRNNKLCQRCNVAQSPCSICMSRNPPEDWLMQASDLM
NTFGTEPKSNSPFSAAQSRLEEDPVKNAAALNPSVLNKGERGLYHKTSGKCGLTLWSWCQ
GCGHGAHTACQVIWLTELSSSEGGCATPGCGHDCGPGPVRERARASRKMARDLQSLRSSS
VSFAKRDSWTAGESKAVERVRGMLGVATASASGTAASSPSPVVAGSGGASAVLSPKKVRL
VTPGEQGKRQDSNTNTSGRRGGGNILKGGKRGRGS
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccgactctccgcggaatcaagggtctgcggcgaacgcagctcctccgccagca
cccccactccctcctgctccccctccattgccgccgcaaagatatgctatcagagcgaca
agcgcgttcgcgcggttcgcccatccgttcttctacgggtcacgtccgcccagtccccag
caaaactcgccgcgcgtgaccagcaccatacctgcgggcttaaagcactctgcttccacg
gctggagcttctcctatagtgtcccacaagaccggcattccgatcgctgcccttgacgta
tctccccagcgcacgcatgccatcctcgccggtagagaaattttgaaaacgatcagagtg
acgcccgatcactgttccgaagaggtcaatattcgttcagccattataggttattctgca
acccacaacgcgtctccggctgcgctctcgtctaagcataaggagcagttatcggcaagg
gacgtgaaatggtcgaatggggaatacgaccaagtaattgcaaccgctgccaccaacggc
cggatcgccgtgtttgatttgaaccgcgctggcgtagagttgggccgttttcatgagcac
acccgtcaggttcacaggttagccttcaatccgcataggggcgcgtggctcctgtcaggc
agccaagatgcgacgatccggatgtgggacttgcgcgttttgtcgggcacaaggggcgtt
gtaaacttcggtagcaaacatcgtttcaatggacatagtgaagcggtgcgagatgtccgt
tggtcgccggccgatggggttgaattcgctacagccacggatagcggtgcgattcagcgg
tgggatgtacgcaaagagaatgcccctttaatgaaaatcaatgcacatgaaaagccatgt
tctgcaattgactggcacccggacggaaagcacctggtgagcggcagtgcagaccgactc
attaaagtctgggacttctcatcgacagatcggaggcagaaaccgtgctttcagcttcgc
actcctcaatcactgtcgaatgtcagatggcgcccggcttcatggactggagacgatgcg
gataccggggattggcaatctacgcaggtggtgaccgcttacgatcaagaagacccgcgt
attcatctctgggattttcgaaggccacatcttcccttcaaggagtttgaccattacagt
cgctctgcaactgacatgttatggctctcaagtgaattgctctggtccgtaaacagcgaa
ggggtgtttacacaagcagatataaaccatgtgcctcaggtcatccagcgacgtaggcct
tgtgccgtggcgtggagtccatctggtgatatcgcattcgctcatcaacgggcaaggaga
tgccaacctagcactagctataatctggcggaattccttgggcatgattataactccggg
tcgaatgaaaagaatgctagtttcactgatgatgcagtcgatgagcctccactggtgcct
catcgaaagcgacctaatagaacagcatactccaggttatccaaatcactcagcggtgca
tcttctatctcagaagatgaaccaccgcaggttgtctctcttgaaaaggctgttgctaaa
agtggatcttatgaaccaacagaaactgggatgattggacggatatctggtgtcacgctt
gatcaagacatcttcacatatcttgcccaaagctattcatctctgttgaccagttatttt
agtcaaggcgcttcgcccacagcaataaaactatttttggacagtttcgatcataatgcg
gcacaggctgaacgtgttggtttgtacaaattgggccgaacctggaagattgccaaatat
gttgtttcaatggaacttacagctcgtgccaaagaacagccaatgcttgaagagaaacca
tcgtcccagaaggatgagcagatcggcgaaaaacgacctgtaaataaggaaccactgact
ggaaaagtttcgagccggttgttcgaaggtgttgctgaggcaaagggtcaagcgctcacg
gccgccgagcttgaaaatggatctgacattgccactcctctagcacgtccgaagtgtgat
gtcccagtgggtaaatctggcggtgataaagaggcgggcctaagagacgatcccccagag
cttgcaccgcttccaccctcagttttggggcataatcagtggtcaaaacaggcggctaca
caggatgaggtgcctgataatgttaggcaaatgcatgagcctgctcagaaggaatcgctc
tccggcggtaacaggtctgcgccgcgtgcaattgctcgtcgtgcagactggaggcttcaa
gatgagggagcacttgagccccaagatgatcgacagaaaaatgattatgatcagatagcg
gaggagaaaaagaccgctttgcgggaatataagccgatctctaaagatgtattgtctctg
gatacattatcccgggggggcaccaggccgcctcaaccgatgacatatgctcggcatgac
tccgctgagagctttcctatgttttccgcctccacggatagctcccaccgtgcaaaatct
cttgctgacgaagctgcttctcctcagaggaaacaggatacttctgatttaggggggagc
ccctggtcggcggttggagacagtccgctacaaactatcccggagcttcaggataattct
ccgtcaaaaggcagagaaagaaatgagagcgatgcatcgttgagtgggatgtcatttgaa
gacattctgcctgatctggatagcattcatctggaacggcctgccgtaccacttccgttc
attgtgcagtcctctccaatcagtaattattcagaagaagaacactcaccgagagaccag
cttgctttgttagacgcccaagcgaatcctgaaagcaatattgctgcatgtgaaggagct
cagagtgaaatcacgaattttcctctctcggttaaatctgtatcccccccctggagcccg
cagtcgatgttgagggaggtggtaaaatattattcctccaactccactgtcgacctagtc
agtgcagtccattttttacacaagctgcatatcctgtttcgttctcttgacgatattatc
ccctacgaagaacggcaatcgatacttcaatcgtacaacgagcagcttttacgtcgcaaa
atgtttattgaagccgctgaggtccgacttcaatgcgcaccgacttaccccgctgtttac
gattatgcccaaaaggactcttacattaatgtttattgttttcagtgcaataagccatat
gaaaactctattcgtaataataaactgtgtcagcgctgtaatgttgcacagtcgccctgc
tcgatctgcatgagccgcaacccaccggaggattggcttatgcaagcttctgatttaatg
aataccttcggcacagagcccaagtccaattcaccattctcggccgcacagtcccggttg
gaagaggatccggtgaagaacgcggctgccctcaatccctccgtgcttaataagggagag
cgcggactctatcataaaacatccggaaaatgtggcctaacgctatggtcttggtgtcaa
ggatgcggccatggcgcgcacactgcctgtcaggtcatttggcttacggaattatcatct
agcgaaggtggctgcgctactcccggctgtggacatgattgtgggcctggcccagtaaga
gaacgcgcccgtgcctccagaaagatggcgcgggatctgcaatccctacgtagctcaagt
gtatcctttgcgaaacgggactcctggactgcaggggaaagcaaggctgttgaaagggtc
agggggatgctgggagtcgcgactgcttctgcctctggaactgccgcgtcgtcgccttca
cctgtcgttgctgggagtggtggtgcctcggcagtgctgtctccaaagaaggttagacta
gttacgcctggggagcaggggaagaggcaggatagtaatactaatactagtggcagaagg
ggcggaggaaatattctaaaaggtggaaagcgaggacgaggaagttaa
DBGET
integrated database retrieval system
