Coccidioides posadasii: 9697645
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Entry
9697645 CDS
T01332
Symbol
RSE1, D8B26_007281
Name
(RefSeq) pre-mRNA-splicing factor rse1
KO
K12830
splicing factor 3B subunit 3
Organism
cpw
Coccidioides posadasii
Pathway
cpw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
9697645 (RSE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpw03021
]
9697645 (RSE1)
03041 Spliceosome [BR:
cpw03041
]
9697645 (RSE1)
03036 Chromosome and associated proteins [BR:
cpw03036
]
9697645 (RSE1)
Transcription machinery [BR:
cpw03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
9697645 (RSE1)
Spliceosome [BR:
cpw03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
9697645 (RSE1)
Complex B
9697645 (RSE1)
Complex C
U2 SnRNP specific factors
9697645 (RSE1)
Chromosome and associated proteins [BR:
cpw03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
9697645 (RSE1)
TFTC complex
9697645 (RSE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
9697645
NCBI-ProteinID:
XP_003072150
UniProt:
C5NZW2
LinkDB
All DBs
Position
4:join(1129639..1129882,1130061..1132134,1132327..1133611,1133679..1133705)
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AA seq
1209 aa
AA seq
DB search
MATTSSMFMYSLTIQPPTAITQAIIGQFSGVKEQQIVIASGSKLSIHEPDSHQGKIRTLY
SQDVFGIIRSLAAFRLAGSSKDYIIIGSDSGRIAIVEYVPSQNRFNRIHLETFGKSGIRR
VVPGQYLAVDPKGRACLIASVEKNKLVYVLNRNAQAELTISSPLEAHRPQTLVFALTALD
VGYENPIFAALEVDYTESDQDPTGAAYQEAEKLLVYYELDLGLNHVVRRWADPVDRSAAM
LFQVPGGADGPSGVLVCSEGNITYRHSNQDAFRVPIPRRSGPTENPERKRYITAGVVHKM
RRAFFCLLQTEDGDLFKVTMDMVEDENGQLTGEVQRLKLKYFDTVPVASSLCILKNGFLF
VASETGNHHFYQFEKLGDDDEETEFSSDDFSADPSEPLAPVYFRPRPAENLNLVESINSL
NPLMSCKITNLTEDDAPQFYTLSGTGARSTFRTLKHGLEVSEIVESELPSVPSAVWTTKL
TRNDQYDAYIILSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGI
RHIHADRRVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDTDGSLAEYDEKREMS
GTVTCLSLGEIPPGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMS
MVDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKSVKLFSVSVKEQRAV
LALSSRPWLGYSDLQTKNFMLTPLDYVPLEWSWNFSSEQCVEGMVGIQGQNLRIFSIEKL
DNNLLQETIPLAYTPRHFVRHPEQPLFYVIEADNNILSPSTKAKLLQDSKAANGEVAELP
PEDFGYPRGTGHWASCIQVVDPINSKAVISRIELEENEAAVSVAAVPFSSQDDETFLVVG
TGKDMVVYPPSSSCGFIHIYRFQEDGKELEFIHKTKVESPPHALLAFQGRLLAGIGRNLR
IYDLGMKQLLRKCQAEVVPRLIVGLQTQGSRIIVSDVQESVTYVVYKYQENRLIPFADDV
IARWTTCTAMVDYETVAGGDKFGNLWLLRCPQKASEEADEDGSGAHLIHERQYLQGAPNR
LSLMVHFYPQDIPTSIQKTQLVAGGRDILVWTGLQGTVGMLVPFVSREDVDFFQSLEMQL
TSQTPPLAGRDHLIYRSYYAPAKGTIDGDLCETYFTLPNDKKLMIAGELDRSVREIERKI
SDMRTKVAY
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacttcgtccatgtttatgtactctcttaccatccagccaccaacagcaatt
actcaagcaataattggccaattttcgggtgttaaggagcaacagatcgtgattgcatcc
ggctctaagctgtcaatccacgaaccagattcacaccagggcaagattcgaactctctac
tcccaggatgtctttgggataatcagatctttggcggcgtttaggcttgcgggcagcagt
aaagactatattatcatcggctctgactctggtcggatcgcaatcgtcgagtatgtccca
tcccagaatcgcttcaatcgaattcacctagagacctttggtaaatctggcattcgacga
gttgttccaggccaatatctcgctgtggatccgaaaggccgagcgtgcttgatagcatcg
gtggaaaagaacaaattggtatatgttcttaaccgaaatgctcaagccgagctcacaata
tcttctcccctcgaagcacatcgacctcagaccctagtcttcgcgctaaccgccctcgat
gtgggctacgagaatcccatatttgcagcactggaggtggattatacagaatctgaccaa
gatccgacgggggcagcttaccaagaagctgaaaagcttcttgtttattacgagcttgat
ctcggtttaaatcatgttgttcgaagatgggcggaccctgtcgatcgttctgcagcgatg
ctcttccaggtacctggcggagcagacggcccaagtggagttcttgtttgtagcgaaggt
aacatcacatatcgtcactccaatcaagacgccttcagagtgccgattccacgtcggagt
ggtcccaccgaaaatcctgaaaggaagcggtatatcacggcgggtgtggttcataaaatg
cggagggcatttttttgtcttttacagacagaggatggagatttgttcaaagttacaatg
gacatggtggaagatgaaaatgggcaattaacaggcgaagtacagcggttgaagctcaaa
tacttcgacaccgtgcccgtcgcatcaagtctttgtatcctcaaaaacggtttccttttc
gtggcaagcgaaaccggtaatcatcatttctaccaattcgagaagctcggtgacgatgat
gaggaaacagaattctcaagtgatgatttttcagcagatccgtcagagccactcgctcca
gtatatttccgtccacggccagcggaaaacctgaatttagtggagagtatcaattcactt
aatcctctgatgagttgcaaaatcacaaaccttacagaagacgatgcccctcaattctat
acactcagcgggacaggtgcacggagcacttttaggaccttgaagcacggcttagaagtg
tcggaaattgtcgaatccgagttacccagtgttccctccgctgtttggacgacaaaactc
actcgcaacgaccaatatgatgcatatatcattctatctttctccaatggaacgttggtt
ttgagtattggcgaaacggtggaagaggtgacggacaccggcttcctctcctctgcgcca
acccttgctgtgcagcaacttggtgaagattcgctcattcaagttcatccaaaaggcatc
cgacacatccacgccgaccgtagggtgaatgaatggcccgcgccacagcatcgatcgatt
gtggctgcagctacaaatgaacgacaggttgccgtggctctaagttctggcgaaattgtc
tacttcgagatggataccgatggttctttagcagaatacgatgaaaagcgtgagatgtca
ggaactgttacgtgccttagtctcggagagatccctcctggtcgcgtgagaagttcgttc
cttgccgtgggatgtgatgattccacagttcgcattttgagtttagatcccgattcaact
ttagaaaataaatcggtccaggctctgacgtctgcaccatccgctttgtcaataatgtca
atggttgactccacgtcgggcggttcgacgctttatcttcatattggattatactcgggc
atctatcttcgcacagtgctcgacgaagttactggcgagctctcagacacgcgcacacgc
tttcttggcctcaagtctgtcaagctatttagtgtgtctgttaaagagcagagggctgtc
cttgcgttaagttcacgtccatggctaggatattccgatttacagacaaagaatttcatg
ctcacacccctggattatgttccactagaatggagctggaactttagcagcgagcaatgc
gttgagggaatggtgggaattcaaggccagaatctaaggattttctctattgagaagctc
gacaacaatctcctccaagagacgattccactcgcctataccccgcgccattttgtccgc
catcctgaacaacctctcttctacgttatcgaggctgacaacaatatactctcgccttct
acgaaagccaagctccttcaggattccaaagcagctaatggagaggtggccgaactgcca
cccgaagattttggctatccacgcggcaccggccattgggcatcatgcatccaagttgtt
gatccaatcaacagtaaggcagttatttcccgtattgaactagaagaaaatgaagcggcc
gttagtgtggcagcggtcccattttccagccaagacgatgaaacgtttttggtggttgga
actggaaaagatatggtggtgtatcctccgtcttcgtcgtgcgggttcatccatatctat
agattccaggaagatggcaaagagctcgagttcattcacaaaaccaaagttgaatcccca
ccgcacgcactcttggctttccagggacgtctcctcgccggcatcggtcgcaatttacgg
atctatgatctgggtatgaagcagctactccgcaagtgccaagctgaagttgtcccacga
ttgattgttggacttcaaacacaaggtagtcgcatcatcgtgagcgacgttcaagaaagc
gtcacgtacgtggtctacaaatatcaggaaaaccgccttatcccatttgccgacgacgta
atagcccgttggacaacgtgtacagcgatggtcgattacgagaccgtcgcaggtggagat
aagtttggaaacctctggctcctgagatgccctcagaaagcatctgaagaggctgatgaa
gatggctctggagcacatctcatccacgaacggcaatatctccaaggtgcaccaaacagg
ctcagcctgatggttcacttctaccctcaagatattcctacaagcatccagaagacgcaa
ttagtggctggaggacgggatatcctggtctggaccggcttacaaggcactgttggaatg
ttggtgccgtttgtcagtcgtgaagacgtggatttcttccagagtcttgagatgcagctt
acttcgcaaacacctccacttgctggccgcgaccatttaatctatcgaagctattatgca
ccagcgaaaggtaccattgatggagacttgtgtgagacgtatttcacattgccgaacgat
aagaaattaatgatcgctggggaattagacaggtctgtccgagagatcgagaggaaaatt
tcggatatgcgtactaaggtggcttactaa
DBGET
integrated database retrieval system
