KEGG   Coccidioides posadasii: 9697662
Entry
9697662           CDS       T01332                                 
Symbol
D8B26_007302
Name
(RefSeq) uncharacterized protein
  KO
K12880  THO complex subunit 3
Organism
cpw  Coccidioides posadasii
Pathway
cpw03013  Nucleocytoplasmic transport
cpw03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    9697662 (D8B26_007302)
  09122 Translation
   03013 Nucleocytoplasmic transport
    9697662 (D8B26_007302)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpw03019]
    9697662 (D8B26_007302)
   03041 Spliceosome [BR:cpw03041]
    9697662 (D8B26_007302)
Messenger RNA biogenesis [BR:cpw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     9697662 (D8B26_007302)
Spliceosome [BR:cpw03041]
 Complex C
  Other components
   EJC/TREX
    9697662 (D8B26_007302)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    9697662 (D8B26_007302)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_WDR3_2nd ANAPC4_WD40 WDR55 Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR75_1st Beta-prop_TEP1_2nd Beta-prop_Aladin EIF3I Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Cytochrom_D1 Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_HPS5 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_WDR36-Utp21_1st WD40_RFWD3 eIF2A Beta-prop_SPT8 Beta-prop_TEP1_C Beta-prop_NOL10_N Beta-prop_Vps41 Beta-prop_WDR41 PALB2_WD40 Beta-prop_NUP159_NUP214 Beta-prop_ACSF4 Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 9697662
NCBI-ProteinID: XP_003072167
UniProt: C5NZ39
LinkDB
Position
4:complement(join(1195159..1195809,1195875..1196187,1196261..1196376))
AA seq 359 aa
MPPPPPSQLIPKDRFGYLFGRLRTQSYTDPNARGPGSHSIRTLAWNPTGLLIATGSADRT
LRIWNPERPDVRYSTELRGHTSGIEQVAFNPVKESELASCSTDGTVRFWDVRSKNCVNRI
DVGGEAFTLSWSADGSVLLAGRMDDTLVPISVDSSSTPTTTTEPSKSGTTAAPYKSLSPH
KQPVRTNGTAFSYSPSNPDLFLTTGDGTVQIVSYPSFHPLHTLNAHTASCHCVSLSPTAR
YLAIGGGDSLISLWDTTDWICKRTVTTSGGGGVRGVSWSWDGRFIVGACDEPDCGGVGLE
IFHAETGESVFTIPVDGSHVVPAVAWHPSRYWLAYSIYADAMGPSSNGLRIVGAGGGGL
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgccgccgcctcctccgtcccagctgatccccaaggatcgctttggctacttgtttggt
agactgagaacacagagctataccgatcccaatgcgcgtggacctggttcgcacagtatt
cgcactctggcatggaatcctaccggccttctcatcgcgacaggttctgccgaccgaaca
ctacgaatatggaacccagagcgccccgatgtgaggtattcgactgagctacgcgggcat
acctctggcattgagcaggttgcttttaaccccgtcaaggaatccgagctagcgagctgc
tcaaccgatggaaccgtccgtttctgggacgtgcgatccaagaactgcgtgaaccgcatc
gatgttggcggagaagcattcactctctcctggtccgctgatggcagcgtgctcctcgca
ggaagaatggacgacactctcgtacccatctctgtcgactcttcctccacacctacaacc
accactgaaccctccaaatcgggtacaacagcggctccctacaaatccctttcgcctcat
aaacaacctgtccgcaccaacggcaccgcattctcctactcaccctcgaacccggacctc
ttcctcaccaccggcgacggcaccgttcaaatcgtatcctacccctccttccacccactt
cacaccctcaacgcccacaccgcctcctgtcactgcgtctccctctccccaacagcccgc
tacctcgcaattggcggtggagactctctaatctccctttgggacaccactgactggatc
tgcaagcgcactgtgacgacttccggcggaggcggagtgcgcggcgtaagctggagctgg
gacgggcgattcattgtaggcgcgtgcgatgagccggattgcggcggtgttgggttagag
attttccatgcggagaccggggagagtgtgtttacgattccggttgatgggtcgcatgtt
gttcccgctgtggcgtggcatccgtcgaggtattggttggcgtattccatttatgcagat
gcgatgggcccgagtagtaacgggttgagaattgtgggtgctggtggtggtggattgtga

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