Coccidioides posadasii: CPC735_015830
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Entry
CPC735_015830 CDS
T01332
Name
(RefSeq) Pre-mRNA splicing factor RNA helicase, putative
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
cpw
Coccidioides posadasii
Pathway
cpw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CPC735_015830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpw03041
]
CPC735_015830
03009 Ribosome biogenesis [BR:
cpw03009
]
CPC735_015830
Enzymes [BR:
cpw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CPC735_015830
Spliceosome [BR:
cpw03041
]
Complex A
U2 snRNP components
U2 related factors
CPC735_015830
Complex B
CPC735_015830
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
CPC735_015830
Ribosome biogenesis [BR:
cpw03009
]
Eukaryotic type
90S particles
Helicases
CPC735_015830
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
SRP54
Flavi_DEAD
T2SSE
AAA_7
AAA_23
nSTAND3
ABC_tran
Motif
Other DBs
NCBI-GeneID:
9692600
NCBI-ProteinID:
XP_003067129
UniProt:
C5PD23
LinkDB
All DBs
Position
Unknown
AA seq
769 aa
AA seq
DB search
MAQKRPETEEKPPAKRLKTTATNVDPRDNPYLAHMFEDSANGNGRANGASTDSPLAEFKR
HKTNSAMARAVENSKVNPFTGKPASERYFSILKTRRDLPVHAQRDEFLQLYQKSQILVFV
GETGSGKTTQIPQFVLYDDLPQLRNKIVACTQPRRVAAMSVAERVANEMDVKLGDEVGYS
IRFEDMTSPKTILKYMTDGMLLREAMHDPDLTRYSTIILDEAHERTMATDVLMGLLKDVV
KRRADLKLIVMSATLDAQKFQRYFNDAPLLAVPGRTHPVEIFYTPEPEQDYVEAAIRTVL
QIHATEPEGDILLFLTGEEEIEDAVRKISLEVDEMIREADAGPMKVYPLYGTLPPAMQQR
IFDPAPPPRKPNGRPGRKCIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLV
SPISKASAQQRAGRAGRTRPGKCFRLYTEGAFKKELIDQTYPEILRSNLSATVLELKKLG
IEDLVHFDLMDPPAPETLMRALEELNYLACLDDEGELTDLGRLASEFPLDPALAVMLISS
AEYYCSNEILSITSLLSVPQVFVRPASQRKRADDMKALFAHPDGDHLTLLNVYHAFKSPE
AQANPRQWCHDHFLSFRALQSADNVRQQLQRIMERNELELVSTPFEDKKYYENIRRALVT
GFFMQVAKKESQGKSLYRTVKDNNDSVLLHPSTVLGHEAEWVLYNEFVLTSKNFIRTVTA
IKGEWLLDMAPSYYDISTFPKGEIRSALLRAAERLSRKERMRSESRKQR
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaaagcgccccgaaacagaagagaagcctccagcgaaacgattgaaaaccacc
gccacaaacgttgatccgcgagacaacccctaccttgcccatatgttcgaagactcggcg
aacggcaacggcagagctaatggagcttcaacggactctcctttagccgaattcaagagg
cacaagacgaactctgcgatggcaagggcggtggaaaactccaaagttaatcctttcacc
ggcaagcctgcaagcgagagatacttttccatcttgaaaacgcgtagagacctgcctgtc
catgcgcaaagagatgaattcttgcagctctatcaaaaatcgcagatcctggtcttcgtt
ggtgaaaccggttctggtaaaacgacgcaaattcctcagtttgtactttacgacgacctt
cctcaactccgaaacaaaatagtggcatgtacccagcctcgtcgagtagcagcaatgtca
gtcgcggagcgcgtcgccaacgagatggacgtcaagcttggagatgaggtcggttatagt
attcgattcgaagacatgaccagccctaagactatcttgaaatatatgaccgacggcatg
ttgctaagagaagctatgcacgaccctgatcttactcgatatagcacaattatcctcgac
gaagcccacgagcgcacaatggcgacagacgtcctgatggggctgctcaaggatgttgta
aagcgcagagccgatttaaaactgattgttatgtctgcgacgctggatgcacaaaagttc
caacgttacttcaacgacgctcctctcttagctgttcctggtcgtactcatccagtcgaa
atcttctatacaccagaaccagagcaagattacgtggaagctgcgattagaaccgtcctg
cagattcatgccaccgagccggaaggcgatatcctcctgtttttgaccggcgaagaagaa
attgaagacgccgttcgcaagatctccctggaggtagatgaaatgatccgagaggcggat
gctggcccgatgaaagtctatcccctgtatggcacgcttccacctgctatgcaacaacgc
atttttgatccagcccctccgcctcgtaagccgaacggacgccctggaagaaaatgcatc
gtctccaccaatatcgccgaaacgtcccttaccatcgacggtatagtttatgtggtcgat
cctgggttttccaagcagaaaatttacaatccccgcatccgtgtggaatcacttttagtc
tcgcctatatccaaggcatcggcacaacagcgtgcaggtcgtgcaggtcgaacacggccc
ggaaagtgcttccgcttatacactgaaggtgcattcaagaaggaactcattgaccaaaca
tatccggaaattctccgttccaacttgtccgcaacggtactagagttaaagaaactcgga
atagaggaccttgttcatttcgatctcatggaccctcctgcccccgagacgctcatgcgc
gctttggaagagctgaattatctcgcttgtttggacgacgagggagaactcacggatctg
gggcgtctagcctcggaattccccttggaccctgcgctagccgtgatgctaatatcttct
gctgagtattattgctccaatgagatcctctcgatcacgtcgcttctttctgtcccgcaa
gtctttgtacgccctgcctcgcaacgaaaacgcgcggacgacatgaaggcattatttgcg
caccctgatggcgatcatttaactctccttaacgtataccacgcattcaaaagtccagag
gcacaggcaaaccctcgacagtggtgtcatgatcatttcctctcgtttcgcgctctgcag
tctgcagacaacgtacgccagcaactacaacgcataatggagcgaaatgaactcgagctt
gtgtctacgccatttgaggacaaaaaatactatgaaaacattcgtcgagctctagtcact
ggatttttcatgcaagttgccaagaaagaaagtcaaggcaagagcttgtatagaaccgtg
aaggataataacgactctgtactgttgcatccaagtacagtgcttggccacgaagcggag
tgggttttgtataacgaattcgttttgacctcgaagaacttcatccgaacggtgaccgct
atcaagggtgaatggctactcgatatggcgccatcatattatgatatttcgactttcccc
aagggcgaaattaggtccgctctacttcgtgctgcagagcggctctcacgaaaggagaga
atgcgttcagaatcgaggaagcaacgataa
DBGET
integrated database retrieval system
