KEGG   Coccidioides posadasii: CPC735_033450
Entry
CPC735_033450     CDS       T01332                                 
Name
(RefSeq) RNB-like family protein
  KO
K18748  protein SSD1
Organism
cpw  Coccidioides posadasii
Brite
KEGG Orthology (KO) [BR:cpw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpw03019]
    CPC735_033450
Messenger RNA biogenesis [BR:cpw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Other mRNA localization factors
     CPC735_033450
SSDB
Motif
Pfam: RNB Dis3l2_C_term OB_Dis3 CSD2 Rrp44_CSD1 DUF5774
Other DBs
NCBI-GeneID: 9695649
NCBI-ProteinID: XP_003070154
UniProt: C5P5L9
LinkDB
Position
Unknown
AA seq 1380 aa
MDQQGQSGIPGPTGRRLHIAHRRSPSELTPLMMEQLALQQQIELLQQQQQQIAATHQQYV
NMGYLQPQQPLQHMTNAYSPTGIQGQGGIPNMPSHGNAFQFPQVQQQQLGVPMNNPNQPS
HRRNQSAMPNVGMGPPPAPSSGSAYGEFSQQGQTQSSQSRENGGQGRGRGAPGGGHQRRH
SLALPEARKAAELAQQKRTTSGFQFPIPGSSGASSSGQGERSSTPEEKAGTAATSTTPQA
PQGLGVHRAGNIRAGAHMRSQSLAVGNGRGPPARGVGGFQFPQTGDGPGDGQRRSSHQGH
GRTASRNFDSNWRQQGNQGQAQDQQRGSMGGFNQQQGAGGFQPGHRVRGSVNQSVGSIGS
FQYTGQPQLIQLPQGPVVMAPPQLFGAQHLGPLQLAQLQAMQQGGQLNGQNMSLQPNQQI
SPQLAAQQQQQQRKTLFTPYLPQANLPALLNDGQLVTGILRVNKKNRSDAYVTTPDLDAD
IFICGSKDRNRALEGDLVAVELLDVDEVWSQKREKEEKKKRKDITDTRSGSSAGIDKGRS
DSVTNGDSQIAPDGSIRRRGSLRQRPTQKKNDDVEVEGQSLLLVEEDEISDEHKPLYAGH
VVAVIERVPGQMFSGSLGLLRPSSQATKEKQEAERQARDGGHSRPQQERQQDKPKIVWFK
PTDKRVPLIAIPTEQAPRDFVEKHQDYANNIFVAAIKRWPITSLHPFGTLVEQLGTMGDL
NVETDALLRDNNFASDEFSDAVLKNVGFENWSLESESAASLASRRDFRDERTLTIDPNGS
NALDNAIHVKSLDDKVEIGFHVADVTHFIKFNSLVDREAKKRGTGVYLMTRIVNMLPPRL
SGEVCSLQPGEDRLTVSVVFRVDPKTGAVEDEPWIGKGIIKSSGKLTYDEIDAAIAGKEV
ELQAATLDEVKLLNSIASKFREARFGHRSADVPPLRLFYQLDDENVPVMHNIFDSSTAHE
LMEELSHKTNSLVAKRLFTAFPQKAFLRRQTSPNFRRLGTFVDRMSRLGYDMDSTSSGTL
QNSLFKIQDVDLRKGMETLLIKAMRRAKYYVAGTVRDEERQHYTLNLPLYTHFTNPSRRY
ADIIVHRQLDAMINNADFPEDIENLSKTADHCNNKKDSAQNAQEQSVHIESCRIIDKKRQ
EIGGDLISEGIVLCVYESAFDVLIPEYGFEKRVHCDQLPLKKAEFRKDERVLELYWEKGV
PSSAYIPEDERPKPTLSSRAANAAAAARQAEEARQRAREREEAQRKQTETGTMSTDDVDA
LFDDDEDDMSELAEMAAGVSLNSPADRSTQSMPPSPTRNGHVQTPHRTQSDPKIAISAAE
APEVKLSNKERYINLFKLREEDGEYIQDVTEMTRVPIILKTDLSKSPPCLTIRSVNPYAL
NT seq 4143 nt   +upstreamnt  +downstreamnt
atggatcaacaagggcagtctgggatcccaggtcccactggtagacggctgcatatcgcc
catcggagaagcccatcagagcttactcctcttatgatggagcaattagctttacagcaa
cagatagagctgcttcagcagcaacagcagcagatcgctgcaactcaccaacaatacgtt
aacatgggatatctacagccccaacaaccgctgcagcacatgactaacgcctactctcca
accggtattcaaggccaaggtggcatccctaacatgccatctcatggaaatgcgttccag
tttccgcaagtccagcaacaacagctcggcgttcccatgaacaatccaaatcaaccatcg
catcgccgcaaccaatctgctatgcctaatgttggaatgggtccccccccggctccctcc
tccgggtcagcttacggcgagttcagccagcaaggccaaacccaatcgagtcaaagtcgg
gagaatggcggtcaaggtcgtggtcggggtgcacctggtggtggacaccaacgtcgccac
tctttagctcttccagaagccagaaaagctgccgaactagcacaacagaaacgaactact
tccggcttccaatttccaatacccggctcttcgggcgcctctagttcaggccagggtgaa
agaagttccacgcccgaagaaaaagcgggcaccgctgccacgagcaccacgccgcaagcc
ccacaaggcttgggggtccaccgggctgggaatatccgtgccggtgctcatatgcgcagc
cagtctcttgccgttggtaatggtcgtgggcctcccgccaggggagttggcggattccaa
ttcccccaaactggagatggtcccggagacggacaacgccgctcaagtcatcaaggacat
ggtcgaactgcctctaggaattttgatagcaattggcgtcaacaaggcaaccagggccag
gcgcaagaccagcagagaggctccatggggggtttcaaccaacagcaaggcgcaggtggt
tttcagccgggtcaccgagtacggggctctgtaaaccagtccgttggctctattggttcc
ttccaatataccggacagcctcagctcatccagctgccccaaggaccggtcgtcatggca
ccacctcaacttttcggtgctcagcatctggggcctcttcaattagctcagttgcaggcc
atgcagcagggcggacagctgaacgggcaaaatatgtcactgcaacctaatcaacaaatc
agccctcagctcgcggcccaacagcagcagcaacagcgaaagaccctgttcaccccatat
cttcctcaagcaaacttgcctgccttgctcaacgacggacagctagtcactggtatctta
cgggtcaacaagaaaaatcggtccgatgcctatgttactacacctgaccttgatgcggat
atctttatctgtggcagcaaggatagaaacagagctcttgaaggtgatcttgtcgccgta
gaacttctcgatgtggacgaagtctggagtcaaaagcgtgaaaaggaagagaagaaaaag
cgaaaggatatcaccgatactcgaagtggcagctccgccggaattgacaaaggcagatcc
gattcagtcacaaacggagactctcaaatcgctcccgatggaagcattcgtcggcgaggt
agtcttcgacagcgcccaacacaaaagaagaatgatgacgtcgaagttgaaggacaaagt
cttttgcttgtcgaagaggatgagatcagcgatgagcacaagccattgtatgcgggtcac
gtcgttgctgtgatagagcgtgtgcctggccagatgttctccggttcgcttggtcttctt
cgtccaagtagccaggcaacaaaggagaagcaagaagctgaacgtcaagccagagatggt
ggccatagtcgacctcagcaggagcggcaacaggacaaaccaaaaatcgtctggttcaaa
cctaccgataagcgtgtgcctcttatcgctattcccacggagcaagctccgagagacttt
gtggagaagcaccaggactacgcaaataacatcttcgtggctgccatcaagagatggcct
attacttctcttcatccattcggaactctggtcgagcaattaggcaccatgggcgacttg
aacgttgaaacggacgctcttttaagagacaacaactttgcttccgatgaattttccgat
gccgtcttgaagaatgttggatttgaaaattggtctttagaaagtgaaagtgccgcatcg
ctcgcctcgcgtcgtgatttccgtgatgagaggaccttgaccattgatcccaacggctcg
aacgcattggacaacgcgattcatgtaaaatcgcttgatgataaagtcgaaatcggcttc
cacgttgctgatgtcactcatttcatcaagttcaactctctagtcgacagggaggcaaag
aagcgtggtactggggtgtacttgatgactcgcattgtgaacatgcttccacctcgtctt
tcaggcgaagtatgctctttgcagccgggagaagatcgcttgacagtcagcgttgtcttc
cgtgtggaccctaagacgggcgctgtcgaggacgaaccctggattggcaaaggaataatc
aagagctcagggaaattgacgtacgatgagatcgatgcagctattgctggcaaggaagtt
gagcttcaagccgctacccttgatgaagttaagctgctgaacagcatcgcgtcgaagttt
agagaagcccgcttcggtcatcgatcagcagatgtgccgccgctgagactattttatcaa
cttgacgacgagaacgtgcctgtcatgcataatatttttgactcttctacagctcacgag
cttatggaggaattaagccacaagacaaactccctcgttgctaaacggctatttacagct
ttcccccagaaggctttccttcgccgccagacatctcccaatttcaggagactgggaact
tttgttgatagaatgtccaggctcgggtacgacatggattccacaagtagtggaactctg
caaaacagccttttcaaaatccaggatgttgacttgcggaaaggcatggaaacacttctg
atcaaggctatgcgccgtgcgaagtattacgttgccggaaccgtccgggatgaagagcga
cagcattataccctcaacttgcctctttacactcactttactaacccgtcgcgccgctac
gcggatattattgtccaccgtcagttagatgcgatgataaataacgctgacttcccggag
gatattgaaaacctctctaaaaccgccgatcactgtaacaacaagaaggattctgcccag
aatgcgcaggaacagagcgttcacatcgaatcttgccgcatcattgacaagaaaagacag
gaaatcggaggtgacctcatcagcgagggcattgtcctttgtgtttacgaatccgctttt
gatgtgctcatcccagaatatggattcgaaaaacgagtacattgtgaccagctccctttg
aagaaggctgagttccgcaaggatgaacgcgtgcttgaactatactgggagaagggcgta
ccatcttccgcctacattcctgaagacgaacgaccaaagcctactctaagttcacgagct
gcgaacgctgccgctgctgctcgccaagcagaggaggccagacagcgagccagagaaaga
gaggaggcgcaaaggaaacaaactgaaacgggtaccatgtcgaccgatgatgtcgatgct
ctcttcgatgacgatgaggatgacatgtccgaattggcagaaatggcagcaggcgtatcg
ctcaactcgccagctgaccgctccacacagagtatgccaccatccccaacgagaaacggc
catgttcaaacgccgcatcggacccaatccgatccgaaaatagcgattagcgccgccgag
gctccagaggtcaaactttccaacaaggagagatatatcaacctctttaaacttcgcgag
gaagatggcgaatatatccaggatgttacagaaatgaccagagtgccaattattctaaag
actgaccttagcaagagtccaccgtgccttactattaggtcggtgaacccatatgcgctt
tga

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