Corynebacterium pseudotuberculosis I19: CPI19_05460
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Entry
CPI19_05460 CDS
T01878
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cpx
Corynebacterium pseudotuberculosis I19
Brite
KEGG Orthology (KO) [BR:
cpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpx03016
]
CPI19_05460
Enzymes [BR:
cpx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CPI19_05460
Transfer RNA biogenesis [BR:
cpx03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CPI19_05460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
GatB_Yqey
Motif
Other DBs
NCBI-ProteinID:
ADO26469
LinkDB
All DBs
Position
complement(1167188..1168393)
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AA seq
401 aa
AA seq
DB search
MPELLYEPREGLPPLCTTVEEIASAARLLESGVGPFAIDTERASGFRYDDRAFLLQIRRR
QAGTVLIDPSVHPEAVTQHLGKAINSHTWIIHAAPSDLPCLRELGLRPSNIFDTELAGRL
MGMPRVNLAAMSEEIVGLTLLKGHGAEDWSRRPLPIDWLNYAALDVETLLDLADAMAELL
DSQGKLEWAEQEFEHLVRMEYENPRQPKQWVDLKGIGSINDPEQLIVAREIWNAREKEAC
ETDKAASRLLPDKAIVGLALSMPQSVRAVERSPGYPSRLRKAARKWLGIVRAARELPPSQ
RPQRNPRPPRPYPAKSLWGRDYPEVLAVWDDVQSSLNSLSLQLEIPIENILQPAALREIV
WLCCTTYSITSHDDLVQALKDHQVREWQIQIVLEPLHRKLL
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagcttctctacgaaccccgggagggtcttcctccgctgtgcacgacagtagaa
gaaatagccagtgctgcgaggcttcttgaatctggcgttggaccttttgccatcgataca
gaacgtgcttctggttttcgttatgacgaccgcgcttttctcctgcagatccgcagaagg
caagctggcacggtacttattgacccctcggttcatccagaggccgttacccagcacctt
gggaaagctatcaattcccatacctggatcattcatgcggctcctagcgatctcccttgt
ctccgggaactagggctacgcccctccaatatttttgacactgaacttgcaggtcgtctc
atgggtatgccacgagtcaaccttgcagcaatgtcggaagaaatcgtgggtcttactttg
ctcaaaggccatggcgcagaggactggtccaggcgccctcttcctatagactggctcaac
tatgctgccttagacgtagaaacccttttggatctagccgacgcaatggcggaattactt
gattctcagggcaagcttgaatgggctgagcaagagtttgagcatcttgtccgcatggaa
tatgaaaatccgcggcagccgaagcaatgggtagatcttaaaggaattggttccattaac
gatcctgaacaacttatcgttgccagagagatctggaatgctagagaaaaagaagcttgt
gaaacagacaaggcggcatcgcgattattaccagataaagcaatagttggtttggctctt
tctatgccgcagagtgtacgggcggtagaacgttctcccggttatccttctcgattacgg
aaagcggctcgtaagtggctggggattgtcagggctgctcgtgagctgcctcctagtcaa
cgtccgcaaaggaaccctcgcccaccgcgaccttatccagcgaaatctttgtgggggcgt
gattaccctgaagtcttggctgtctgggatgatgtgcagagctctttgaattctctatcc
ctccagttagagattcctattgagaatattcttcagcctgcagcactccgggaaatcgtc
tggttgtgctgcaccacgtactcaattacttctcatgatgacctggtgcaagccttaaaa
gatcaccaagtacgcgaatggcaaatccagattgttctcgagccgctgcaccgcaagctt
ttataa
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