Corynebacterium pseudotuberculosis I19: CPI19_07445
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Entry
CPI19_07445 CDS
T01878
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cpx
Corynebacterium pseudotuberculosis I19
Pathway
cpx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CPI19_07445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpx03019
]
CPI19_07445
03009 Ribosome biogenesis [BR:
cpx03009
]
CPI19_07445
Enzymes [BR:
cpx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CPI19_07445
Messenger RNA biogenesis [BR:
cpx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CPI19_07445
Ribosome biogenesis [BR:
cpx03009
]
Prokaryotic type
rRNA helicases
CPI19_07445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
adh_short
Surface-like_ins_dom
Motif
Other DBs
NCBI-ProteinID:
ADO26085
LinkDB
All DBs
Position
complement(1617136..1619118)
Genome browser
AA seq
660 aa
AA seq
DB search
MSITDDATGGANEPDEKILSESQDNSQVDEGSITLDDVIADVDDSRVANTSEDTGSAQEA
DSDSNDGFEALGLPDAILKAVAKVGFETPSPIQAQTIPVLMEGHDVMGLAQTGTGKTAAF
ALPILSRINVKKRHPQALILAPTRELALQVADSFQSFADHLGDIHVLPIYGGQAYGIQLS
GLRRGAQIIVGTPGRVIDHLEKGSLDISNLNYLVLDEADEMLSMGFQEDIERILEDTPAD
KQVALFSATMPNGIRRLSKQYMKDPREIQVKSETRTNTNITQRFLNVAHRNKLDALTRIL
EVTEFEAMIMFVRTKHETEEVAEKLRARGFSAAAINGDIAQAQRERTVDQLKDGRLDILV
ATDVAARGLDVERITHVFNYDIPNDTESYVHRIGRTGRAGRSGEAILFVTPRERRMLRSI
ERATNAELIEMDLPTVDEVNESRKEKFADSITESLEDSQVAIFRNLIKAYAEEHDTPLED
IAAALATQARAGSEFLMKEPPPEKRRERRDRFDRDDRRGDRRDRGDRRDRGDRGSRFERS
GDMAVYRLAVGKRQHVRPGAIVGALANEGGLSNKDFGRITIAVDHTLVELPKGLPQSVFD
NLRDTRISGQLINIEKDNGRPGRRDDYRGDDRRGGYRRDRRDDRRGDRRDRGDRRDRYRG
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgagcattaccgatgacgccaccggcggcgctaacgagccggatgagaagattttgtcg
gaatctcaggacaattcgcaggtagacgaaggcagcatcacacttgatgatgttattgct
gatgtagacgactccagggttgcgaacacttctgaggacaccggctccgcgcaagaagcg
gacagtgacagtaatgatggctttgaggctttgggcctcccagacgcaatccttaaggca
gtcgccaaggttggctttgaaacgccgtctcctattcaggcacagaccatcccagtcctc
atggaggggcatgatgtgatgggtctggctcagaccggtacgggtaagaccgctgcgttt
gccctcccgattctttcccgtatcaatgtgaagaagcgccacccacaggcgctgatcctt
gctcctactcgcgagcttgctcttcaggttgcggactctttccagtcttttgcagaccac
ctcggagacattcatgttctgccgatctatggtgggcaggcatatggtatccaattgtcg
ggtcttcgccgtggcgcgcagatcatcgtgggtaccccaggtcgtgttattgaccacctg
gaaaagggctcactcgatatctctaacctgaactatctcgttcttgacgaggcagatgag
atgctcagcatgggcttccaggaagatatcgagcgtattcttgaggatactcccgcggac
aagcaggttgctttattttctgcgacgatgcccaacggcattcgccgtctgagcaagcag
tacatgaaggatcctcgtgagattcaggtgaaatccgagactcggaccaacaccaatatc
acgcagcggttccttaatgttgctcaccgtaacaagcttgatgccttgactcgaatcctt
gaggtcaccgagtttgaagcgatgattatgttcgtgcgcacaaagcatgaaactgaagag
gtcgcagagaagttgcgtgctcgtggtttttctgccgccgccatcaatggcgatatcgca
caggcacagcgtgagcgcaccgtggaccaactcaaagatggtcgtctagacattcttgtg
gccacagacgtggcagcgcgtggtctggatgtcgagcgcattactcacgtgttcaactac
gacattcctaatgacaccgaatcttatgttcaccgcattggtcgtaccggccgcgctgga
cgtagcggtgaggcaattctttttgttaccccacgtgaacgtcgtatgctgcgctccatt
gagcgtgctaccaatgcagagcttattgaaatggaccttcctacggtcgacgaggttaac
gagtcccgtaaggaaaagtttgcagattccatcacagaatcgctagaagactcccaggtt
gcgattttccggaacttgatcaaggcctacgcagaagagcatgacaccccacttgaggac
attgctgctgccttggctacccaggctcgtgctggtagtgagtttttgatgaaggagcca
ccaccagagaagcgtcgtgagcgtcgcgatcgctttgaccgggacgatcgtcgtggcgat
cgccgggaccgcggcgaccgccgtgatcgtggtgaccgcggttctcgttttgagcgctct
ggcgatatggcagtgtatcgccttgccgtgggtaagcgtcagcatgttcgtccgggcgct
attgttggcgcactggcaaacgaaggcggattgagcaataaggactttggtcgtatcaca
attgctgtggaccacacgttggtggagcttcctaagggactcccacaatctgtctttgat
aatctacgcgacactcgtatctcgggtcagctgattaacattgagaaggacaatggtcgt
ccggggcgtcgtgatgattaccgcggtgatgaccgtcgtggtggataccgtcgcgatcgt
cgtgatgatcgtcgtggcgaccgccgagaccgcggcgaccgccgtgatcgctatcgtggc
tag
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