Corynebacterium pseudotuberculosis I19: CPI19_08290
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Entry
CPI19_08290 CDS
T01878
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cpx
Corynebacterium pseudotuberculosis I19
Pathway
cpx03420
Nucleotide excision repair
cpx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CPI19_08290 (pcrA)
03430 Mismatch repair
CPI19_08290 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpx03400
]
CPI19_08290 (pcrA)
Enzymes [BR:
cpx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CPI19_08290 (pcrA)
DNA repair and recombination proteins [BR:
cpx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CPI19_08290 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CPI19_08290 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
DEAD
ResIII
OstA_2
Motif
Other DBs
NCBI-ProteinID:
ADO25916
LinkDB
All DBs
Position
complement(1795052..1797592)
Genome browser
AA seq
846 aa
AA seq
DB search
MNNSDDFPTQQGFDFGDWATAKKTPAEPSPFSSHTYRQEEHRTWTTAKDQQPASTSAPAD
DLVQGLNPQQQQAVEHSGSPLLIVAGAGSGKTAVLTRRIAYLMRIRGVQPGQILAITFTN
KAAAEMRERVAHLVGPIASRMWVSTFHSTCVRILREQAQLVAGLNSNFTIYDSDDSKRLL
AMISKDMNLDIKKFTPRLLGAGISNLKNELISPATAVAEAESTKNPYETTVAAVYVEYQR
RLRQANAVDFDDLIGETVRIFKEHPQVTEYYRRRFRHVLIDEYQDTNHAQYVLIHELVGT
GETASELCVVGDSDQSIYAFRGATIRNIEEFERDYPNATTVLLEQNYRSTQTILNAANSV
ISQNENRRKKKLWTALGSGDPITGYVADNEHDEARFIAQEIDALADKGIDYSDMAIMYRT
NNSSRAVEDVFMRSGIPYKVVGGTRFYERKEIRDVIAYLRLLDNPEDTVSLRRIINTPRR
GIGDKAVAFLTLHSENQGVSLQQALIDASEGQVSLLGARGRNAISGFVNMMSGLRDSAAE
SVNEITGMPDIGNVIAQILDITGYKAELEKSNDPQDGARLDNLNELVSVAREFSSEAANQ
VAYAKMDGSELDDLAAVGEPEPGSLQAFLERVSLVADADQIPDNEQGLVTLMTLHTAKGL
EFPVVFLMGWEDGQFPHLRALGDPKELAEERRLAYVGITRARKALYITRAMLRSSWGNPV
TNPASRFLTEIPQELLDWRREEPESSFDAWGQPSWGRNTGFSSARGDSWGSPRYGASPKP
KKTMPSYAKNSDLSLVVGDRVNHDKYGLGTVTKVDKGSPADSVTIDFGSSGTVRLMLIGP
VPMEKL
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgaataactctgacgattttccaacccaacaaggttttgactttggcgattgggctacc
gccaaaaagacgccagctgaaccatctccgtttagctctcatacctacagacaagaagag
cacaggacctggactacagcaaaggatcagcagcctgctagcacgtctgcaccggctgat
gacttggtccaggggcttaatccgcaacaacagcaagcagtagaacacagtggctccccg
ttacttattgtggccggcgcaggttcaggcaagacagcagtacttacgcgccgtatcgcc
tacctcatgcgcatacgaggcgtgcagccaggacagattttagctatcacatttaccaat
aaggctgcggctgaaatgcgagagcgcgtggctcatctcgtggggccgatcgccagcaga
atgtgggtgtctaccttccactccacgtgcgtacgcatcttgcgagaacaggctcagctg
gttgctggattaaacagcaatttcaccatctatgactcagatgattcaaagcgattactc
gcgatgatctctaaagatatgaacttagacatcaaaaagttcacgccgcgcttattgggg
gcgggaatctctaacctcaaaaatgagttgatttctcccgccacggcagtcgcagaagcc
gaaagtactaagaatccgtatgagacgacggtagctgccgtatacgttgagtatcagcga
cgcttaagacaagctaacgcggtcgattttgatgacctcatcggagagacagtacgtata
ttcaaagagcacccccaagtaaccgaatattacaggcgcagattccgccatgtgcttatc
gacgaataccaggacaccaaccacgcacaatatgtccttattcatgaactggtagggact
ggggaaaccgctagtgaattatgcgttgtcggagattcagatcagtccatttatgccttc
cggggcgcaactatacgcaacattgaggaatttgagagggactatcccaacgccacgacc
gttctcttggagcagaactaccggtcgacacaaacgatccttaacgcggctaactcggtg
atctcccaaaacgagaaccgacgaaaaaagaaattgtggacggcgctaggtagcggggat
ccaatcacagggtatgtcgcagataatgagcatgatgaggcccgttttattgcccaagaa
atagatgcgctcgcagataaaggcattgattacagcgatatggccattatgtatcgcaca
aataactcatcgcgtgccgtggaagacgtgttcatgcgttctggtattccctataaggtc
gtgggaggaacccgattctatgagcgcaaagagatccgggacgttattgcttatctacgt
ttactggataaccccgaagatacggtttctctccgtaggattattaacacgccgcgccgg
gggatcggcgataaagccgtagcgtttctcaccctacattcagagaaccaaggagtgagt
ctccaacaagcgcttatcgacgcctccgaggggcaggtgagtcttctaggggcgcgcgga
cgcaacgcgatttcgggctttgtgaacatgatgtctgggctgagggatagcgcagccgaa
tccgtcaacgagatcaccggtatgccagatattggcaatgttattgctcaaatacttgat
atcacgggatataaggcagagctggaaaagagtaacgatccacaagatggtgcacgatta
gacaaccttaacgagcttgtctcggttgcccgagagttttcctcagaggcggccaaccag
gtggcgtatgccaagatggacggcagcgaactcgatgatttagctgctgtgggagaacca
gaaccgggtagtttgcaggcttttctggagagggtctcccttgtcgctgatgccgaccaa
atccctgataatgagcagggcttggtcactcttatgactttgcatacagccaaaggacta
gagttcccggttgtcttcctaatggggtgggaagacggacaatttcctcacctgcgcgcg
ctgggagaccccaaagaacttgcggaggaacgacggcttgcgtatgtgggaataacgcgc
gcgcgcaaggccctctatataacccgagctatgttgaggtcctcctggggaaatcccgta
actaacccggcatcaaggtttcttacagagattcctcaagagcttcttgattggcggcga
gaggaaccagaaagttctttcgatgcgtgggggcagccttcctggggcagaaacacaggc
tttagctccgcgcgcggcgattcgtggggatcaccgcgttatggtgccagcccgaaaccc
aagaaaacgatgccaagctatgcaaagaacagcgatctttctttggtagtcggagatcgg
gttaatcatgataaatatggccttggtaccgtgaccaaggtggacaaaggcagtccggcg
gattccgtaactattgattttggttcctctggaacagtacggcttatgctgatcggccca
gttccaatggaaaagctttag
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