Lachnoclostridium phytofermentans: Cphy_0046
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Entry
Cphy_0046 CDS
T00619
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cpy
Lachnoclostridium phytofermentans
Pathway
cpy03030
DNA replication
cpy03430
Mismatch repair
cpy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cphy_0046
03430 Mismatch repair
Cphy_0046
03440 Homologous recombination
Cphy_0046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpy03032
]
Cphy_0046
03400 DNA repair and recombination proteins [BR:
cpy03400
]
Cphy_0046
Enzymes [BR:
cpy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cphy_0046
DNA replication proteins [BR:
cpy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Cphy_0046
DNA repair and recombination proteins [BR:
cpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Cphy_0046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
RuvB_N
AAA_22
TIP49
AAA_18
AAA_14
AAA_5
AAA_19
AAA_30
Rad17
AAA_2
ResIII
AAA_24
AAA_assoc_2
PIF1
Mg_chelatase
AAA_7
Viral_helicase1
AAA_16
AAA_28
DUF815
AAA_17
ABC_tran
AAR2
TsaE
RNA_helicase
SKI
Motif
Other DBs
NCBI-ProteinID:
ABX40436
UniProt:
A9KQC7
LinkDB
All DBs
Position
63796..65364
Genome browser
AA seq
522 aa
AA seq
DB search
MSYMALYRKFRPDTFEDVKGQDHIVTTLKNQIKAKRIGHAYLFCGTRGTGKTTVAKILAK
TVNCEHPIDGNPCNECAMCKAIQSQSSMNVIEIDAASNNGVDNIREIVEEVKYSPTEGNY
KVYIIDEVHMLSAGAFNALLKTLEEPPSYVIFILATTEVHKIPITILSRCQRYDFRRVTI
DEITKRLRVITEKEGIEAEEKALRYVARAADGSFRDALSLLDQCIAFYFGQSLTYDNVLD
ALGTVDIEVFARLLRYIRKGSVTDCVAILEELIIQGRELTQFTIDFTWYLRNLLLAKTSE
DMEEILEMSSDQLQLLKQEAQSCDTELLIRFIRIFSELSNQVKYATQKRVMIEVALVKLC
KPAMETDYASLIHRIQVLENRLEEGVFVTSKDEIEGAVPVVEKAKKASVPVELPKAVSAD
LQEVARNWNSILRSLPPLVRTVLISARVVPGEGNTIILVFEKEVDEGVINQESHLEEIKT
AIADTIGKEVLVQTKVIKDGEALEAYPDLTKIMKKVPIEYVD
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtcatacatggcattatatagaaagtttcgcccagacacatttgaagatgttaagggg
caagatcatattgttacaacactgaaaaatcaaatcaaggcgaagcgtatcgggcatgca
tacctgttttgcggtactcgtggtactggaaagacaacagtagcgaaaatactagcaaaa
acagtgaactgtgagcatcctatagatggtaatccatgcaatgaatgtgcaatgtgtaaa
gcgatacaatcgcaaagctcgatgaacgttatagaaattgatgctgcatccaataatggc
gtggataatatcagggagattgtagaagaagtaaagtattccccaacggaaggaaattat
aaggtatatattatagacgaggttcatatgctttctgcgggagcatttaatgcactgtta
aaaacattagaggagccaccgtcctatgtaatatttatactggcaactacggaagtacac
aagataccgattaccatattatcacgttgtcaacgctatgattttcgtagagttaccatt
gatgaaataacgaaacgattgcgggtaattaccgaaaaagaaggcattgaagcagaggag
aaggcattaagatatgttgctagagcagcagatggatcttttcgagatgcgcttagcctt
ttagatcaatgcattgccttttactttggacagtctttaacttatgataatgtattagat
gcattgggaaccgtagatattgaggtttttgcaaggctcttacgttacattcgaaaagga
agtgtaactgattgtgtagcgattttagaagaattaattattcaaggaagagagcttaca
caatttacgatagactttacctggtatttaagaaatttacttttggcaaagacttcagaa
gatatggaagaaattcttgagatgtcaagtgaccaattgcagttattaaaacaggaagca
caaagttgtgatacggaacttttgatacgttttatccgtattttttcagagttatcaaat
caagtgaagtatgcaacacaaaagagagttatgattgaggttgcattggtaaagctatgt
aaaccagcaatggaaacagactatgcctcattaatccatcggatacaggtactagaaaac
cgtttagaggaaggtgtttttgtaacctctaaggatgaaatagaaggtgcagtacctgtg
gtagaaaaggctaagaaagcttcggtaccagtagagttacccaaagctgtgagtgctgat
ttacaagaagttgcaaggaattggaattcaattctaagaagtttgcctccattggtacga
acggtactgattagtgcacgcgttgtacctggagaaggaaatacgataatcctggtgttt
gagaaggaagtagatgagggtgtgattaatcaagaatctcatcttgaagaaattaaaaca
gcaatcgcagataccattggaaaagaagtcttagttcaaactaaggtgataaaggatgga
gaagctttagaagcttatcctgatttaacaaaaataatgaaaaaggttccgattgaatat
gtcgattaa
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