Lachnoclostridium phytofermentans: Cphy_0126
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Entry
Cphy_0126 CDS
T00619
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cpy
Lachnoclostridium phytofermentans
Brite
KEGG Orthology (KO) [BR:
cpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpy03016
]
Cphy_0126
Enzymes [BR:
cpy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Cphy_0126
Transfer RNA biogenesis [BR:
cpy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Cphy_0126
Prokaryotic type
Cphy_0126
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
SH3-C_UBE2O
Motif
Other DBs
NCBI-ProteinID:
ABX40515
UniProt:
A9KR47
LinkDB
All DBs
Position
169161..169955
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AA seq
264 aa
AA seq
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MPGEMDRKRNIKLIISYDGTNYSGWQRIPKAANGDHSIQGLLEEFLSKVLLEPIKLIGSG
RTDTGVHALGQVANFYSRSNLDVNIIRQKMNQVLPEDIKILQANEVDLNFHSRFDAVEKI
YQYIIDTKERESVFFRKYSYSCGKDLDIEAMRQAAKLLIGTMDYKSFCTDRKDGKSTIRT
ISEITIEELRQNRNQQGIIFTFRGNGFLHHMIRIISGTLLEVGTQERSVESVRQAILGKK
REYAGITLYPQGLFLKQVIYDKNS
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcctggtgaaatggatagaaagcgcaacataaaacttatcataagctacgatgggaca
aattatagtggttggcagagaattcccaaagcagcaaatggtgatcattctattcagggg
ttactagaagaatttttatctaaggttttgctagaaccaattaagctgattggctcaggc
cgcacagatacaggagttcatgctcttggacaggtggcaaatttttattcgcgctccaat
ctcgacgtaaatattataagacaaaagatgaatcaagttcttccggaggatattaagata
ctacaagcgaacgaagtggacttaaattttcattcccgctttgatgcggtagagaaaatc
tatcagtatatcatagataccaaagaacgggaaagtgtattttttcgtaaatattcatat
tcttgtggtaaggatttggatattgaagcaatgaggcaagctgcaaaattactcattggc
acgatggattataagagcttctgtacagatcgtaaggatggtaagtcgactatccggacg
atatctgagataacgatagaagaactacgacagaatagaaatcaacagggtattattttt
acgtttcgtgggaatggatttttacatcacatgatacgtatcatttctggaacactgttg
gaggttgggacacaagagagaagtgtggaaagtgttaggcaggctattttggggaaaaag
agagaatatgccgggataacactgtatccgcaagggttatttttaaaacaagtcatttat
gataaaaatagttag
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