Lachnoclostridium phytofermentans: Cphy_0158
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Entry
Cphy_0158 CDS
T00619
Name
(GenBank) metal dependent phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
cpy
Lachnoclostridium phytofermentans
Brite
KEGG Orthology (KO) [BR:
cpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpy03019
]
Cphy_0158
Messenger RNA biogenesis [BR:
cpy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Cphy_0158
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
HDOD
TraI_2
Motif
Other DBs
NCBI-ProteinID:
ABX40547
UniProt:
A9KR79
LinkDB
All DBs
Position
204918..205865
Genome browser
AA seq
315 aa
AA seq
DB search
MRYLGELRDGEMFKETYLCKQLQILKTKAGKSYYSMLIQDKTGIKDAKVWELGPGIEHFD
TMDYIHIEGQVTCFQGSLQLNVKRVRKCQEGEYDPADYMPSTDKNVEDMYKELLRYVDKI
KEPHVKKLAQSFFVEDKDFALRFKRHSAAKSVHHGFMGGLLEHTLGVVRLCDYLADQYPL
IQRDLLLVSAMFHDLGKLDEISSFPENDYTDEGNLLGHIFIGTAKLNERMKTIPGFPKKM
ASEIMHCILAHHGELEYGSPKKPALMEALALSMADNLDAKLQTMKEILTGEEDKNDWLGF
QRLFESNVRRTSDYE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagatatttaggtgagttacgagacggagaaatgtttaaggaaacatatctttgtaag
caacttcaaattttaaaaacaaaggctggaaaaagctattattccatgttaatacaagat
aaaaccggaataaaagatgctaaggtatgggaactaggccctggaattgaacattttgat
accatggattatatacatatcgaagggcaagtaacttgttttcaaggctccttacagcta
aatgtaaaacgtgttagaaaatgccaagagggtgaatatgatcctgcagattatatgccg
tctaccgataagaatgtcgaggatatgtataaggaattactaagatatgtagacaaaata
aaagagccacatgtaaagaagttagcgcaaagtttttttgtggaagataaggactttgca
ttacgatttaagaggcactctgctgcaaagagcgtacatcacggctttatgggcggatta
ctggagcatacactaggagtggtacgtttatgtgattacttagcggatcaatatccattg
attcaaagagatttattattagtatcagcgatgtttcatgatcttggtaagttagatgaa
atctctagcttccctgaaaacgattacaccgacgaaggtaacctccttggtcatatcttt
attggaactgctaagttaaatgaaagaatgaagacaattcctggatttcccaagaagatg
gcgagcgaaattatgcattgtatcttagcacatcatggagaactggaatatggatcacca
aagaagccagcacttatggaagcattagctcttagtatggcggataatttagatgcaaag
ttacagactatgaaggaaatcttaacaggagaagaggataagaatgattggcttggattc
cagcgcttatttgagtctaacgtgagaagaacttcagattatgaataa
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