Lachnoclostridium phytofermentans: Cphy_0159
Help
Entry
Cphy_0159 CDS
T00619
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
cpy
Lachnoclostridium phytofermentans
Brite
KEGG Orthology (KO) [BR:
cpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpy03009
]
Cphy_0159
Enzymes [BR:
cpy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Cphy_0159
Ribosome biogenesis [BR:
cpy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Cphy_0159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
TRM5-TYW2_MTfase
Methyltransf_25
Methyltransf_15
MTS
PrmA
Cons_hypoth95
Methyltransf_11
Methyltransf_12
DOT1
PCMT
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
ABX40548
UniProt:
A9KR80
LinkDB
All DBs
Position
206112..207518
Genome browser
AA seq
468 aa
AA seq
DB search
MEQVKIPGKNEVVPITIEDIGADGEGIGKVHGFTLFVKDAVVGDELLVKVMKTKKTYGYA
RIEQIVTPSPYRVNPRCEIASKCGGCQIQQLSYEEQLRYKQNKVLNCLKRIGGIENPPME
PIVGMENPYYYRNKAQFPVGKRTDGEVVIGFYAGRTHSIIDTAKCHIGDESTEPLIACIR
NFLKQENISIYDEESHQGLVRHILLRVGFTTKELMICVVINGKELPASDKLIKQILACPN
LPKDFRVTSICLNKNTKKTNVILGEEIIPLYGPTYITDYIGDIKYQISPLSFYQVNPVQT
KKLYELALDYTDLTGNELVWDLYCGIGTISLFLAQKAKMVYGVEIIPQAIEDAKSNAKLN
DINNAEFFVGAAEEVLPKQYQLSGGKIYADVIVVDPPRKGCDESLLETIVAMEPKRIVYV
SCDPATLARDLKYLIEHGYDLKKVRPVDQFPHSVHVESVTLLTRRNEL
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggttaagataccagggaagaatgaagtcgtaccaataacgatagaagacatc
ggtgcagatggggaagggattggaaaggtacatggattcactctgtttgtaaaggatgca
gtagtaggagatgaacttcttgttaaggtaatgaagactaagaaaacctatggttatgcc
cgtatcgaacagattgtaaccccatccccttaccgtgttaatccaagatgtgagattgca
tcaaagtgtggaggttgtcagattcaacaattatcctatgaggagcaattacgctataag
cagaataaagttcttaattgtttaaagagaattggtggaattgaaaatccaccgatggag
ccaattgttggtatggagaacccttattactatcgtaataaagcgcaatttccagttgga
aaacgaacggacggtgaagtagtgatcggattttatgcaggtagaactcattccattatc
gatactgctaaatgccacataggtgacgaaagtacagaacctctcattgcttgcattcga
aattttttgaagcaggaaaacatcagtatttatgacgaagaaagtcaccaaggactagta
agacacatcctacttcgagttggatttactacaaaggaactaatgatatgcgtagttatc
aacggcaaagagttaccagctagcgataagttaataaaacaaattttagcatgtccgaac
cttccaaaagattttagggtcaccagtatctgtcttaataagaataccaagaaaacgaat
gtaatcttaggggaggagatcatacctttatatggtcctacctacattacggattatatc
ggtgatataaaatatcaaatctcaccattatccttttatcaggtaaacccagtacagaca
aagaagctatatgagctggcactggattatacagatctaacagggaatgaacttgtttgg
gatttatactgtgggattggaacgatttcgttattcttagcccaaaaagcaaagatggtg
tatggggttgagattataccgcaagctatcgaggatgccaaatcaaatgctaaattaaac
gacatcaacaatgcagagttttttgtaggtgcagcagaagaggtattgccaaaacagtat
caattaagcggtggtaagatctatgcagatgtgattgttgtagacccacctagaaaagga
tgcgacgaaagtttattagaaactatcgttgctatggaaccaaaaagaattgtttatgtt
tcctgtgacccggcaacactggcaagggatttaaaatatttgatagagcatgggtatgat
cttaagaaggttagaccagttgatcaattcccgcactcggtgcacgttgaatccgtaaca
cttcttacaagaaggaatgagttgtaa
DBGET
integrated database retrieval system
