Lachnoclostridium phytofermentans: Cphy_0442
Help
Entry
Cphy_0442 CDS
T00619
Name
(GenBank) ABC transporter related
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cpy
Lachnoclostridium phytofermentans
Pathway
cpy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cpy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Cphy_0442
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpy02000
]
Cphy_0442
Transporters [BR:
cpy02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Cphy_0442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
nSTAND3
DUF87
AAA_22
Zeta_toxin
AAA_14
RsgA_GTPase
AAA_16
AAA_29
Dynamin_N
DEAD
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ABX40829
UniProt:
A9KHG2
LinkDB
All DBs
Position
562582..564438
Genome browser
AA seq
618 aa
AA seq
DB search
MIGKYIKRYKWSYLLGIITLFAVDLLGLLIPEYTGKITDGLKDKTMDFQGVLYMIGLILA
VGGLMALGRFLWRIFIFGGARKIEYALRNDMFEHLTTLSTRYFNENKTGDFMAHFTSDLS
AIRMALGPAVVTTFDAIIMTIMVVVKMVFYVDLRLTLLACIPMTFIMIGGIYFGSKVEKR
FTKKQEAFSNMTDEVQESISGVRVVKAFVQEEKEIVSFSKTNLKNKKANLQVVKLQATVL
PLLDLLIGLSSVITLLFGGKLVLDGVITAGKFVAFISYIGMLVWPMIAAGESINLLSQGF
ASIKRVRTIFMEQPEIVDGPECDNKVTKLLGEIALNHLTFSYKEGNTPVLQDISVKIPKG
NTLAILGRTGSGKTTIANLLLRLYDVEDGMITFDRNSIRKIPLHVLREQIAYVPQDNFLF
SDTIQTNIAFGVRKLRDIEEEEEKMKLFPSKKERMEAHLESDFMKTESKADGIYQDLDMV
QEAAKTACIHDNIMDFPKQYSTMVGERGVTVSGGQKQRSSIARALMKDAPILILDDALSA
VDTNTEEQILRNLKENRKDKTTIIIAHRISTIQNADNILVLEEGRVAEYGNHENLLAEQG
IYAKLYEKQQLEKQLERE
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgataggaaagtacatcaagagatataagtggagttatctcctaggaattataacctta
tttgcagtagacctgttggggctgctaataccagagtatactggtaaaatcaccgatggc
ctaaaggacaaaacgatggattttcaaggtgttttatatatgataggtttgattctggcg
gtcggaggcttaatggccctcgggcgttttttatggcgtatttttatctttggtggagcc
agaaaaatagagtatgctctaagaaatgatatgtttgaacaccttaccacactttctact
cgttattttaacgaaaataagactggggactttatggctcactttaccagtgatctttct
gccattcgtatggcgcttggtccagcagtagttacaacatttgatgcgattataatgacg
ataatggtagtagttaagatggtgttttacgttgaccttcgtttaacgttgcttgcctgt
attccaatgaccttcattatgattggtggtatttattttggcagtaaggtggaaaaaaga
ttcacgaagaagcaagaggctttttcaaatatgacagatgaggtacaggagagtatttct
ggagtaagagtagtaaaagcatttgtccaagaagaaaaggaaattgtatctttttctaag
acaaatttaaaaaataaaaaagcaaatctccaggttgttaaacttcaagcaaccgtgtta
ccactacttgatttattgattggtctttcgagtgttattacacttctttttggtggtaaa
cttgttcttgatggtgtgattactgctggtaaatttgttgcatttatttcttatatagga
atgctagtatggccaatgatagcagctggggagagtattaacttgctttctcaggggttt
gcatcaataaaacgagtacgtaccatttttatggagcaacctgagattgtagatgggcct
gagtgtgataataaagttacgaaacttcttggtgagatagctttaaatcatctcacattt
tcctataaggaagggaatacccctgttctacaagatatctcagtaaagattccaaaaggt
aatacgcttgcaatacttggtcgtactggtagcggaaagactacaatagcgaacctatta
cttcgtttatacgacgtagaagatggaatgataacttttgatagaaatagcattcgtaag
attccgcttcatgttttaagagagcagattgcttatgtaccacaagataatttcttattt
tccgatacgattcaaaccaatattgcgtttggtgtacgaaaactacgtgacatagaagaa
gaggaagagaagatgaagttattcccttcaaaaaaggaacgaatggaagcgcacttagaa
agtgatttcatgaagacagagagtaaggcagatggcatctatcaggatttagatatggta
caagaggccgctaaaacagcatgtattcatgataatatcatggacttcccaaaacagtat
tcaacaatggtgggtgaacgaggagtaactgtatccggtgggcaaaaacaacgaagctcc
atcgcaagggctttaatgaaggatgcgcctattttaatcttagatgatgcactttctgcg
gttgatacgaatacagaagagcaaattcttcgtaatctgaaagaaaatcgtaaggataag
acaaccattattatcgcacatcgtatctcaaccattcagaatgcagataacattttagtg
cttgaggaaggaagggttgccgaatatggcaatcacgagaatctgttagcagaacagggt
atctatgctaaactctatgaaaaacagcagttagaaaaacaattagagagagaataa
DBGET
integrated database retrieval system
