Lachnoclostridium phytofermentans: Cphy_0647
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Entry
Cphy_0647 CDS
T00619
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
cpy
Lachnoclostridium phytofermentans
Pathway
cpy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Cphy_0647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpy03400
]
Cphy_0647
DNA repair and recombination proteins [BR:
cpy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Cphy_0647
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Cphy_0647
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Feld-I_B
Zn_ribbon_8
Zn_Ribbon_Prim
Motif
Other DBs
NCBI-ProteinID:
ABX41034
UniProt:
A9KJ35
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All DBs
Position
842815..843555
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AA seq
246 aa
AA seq
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MTGTVTVTGIVLATIPIGDYDKRLTILTKERGKIGAFAKGARRPNSALLACSQPFTYGEF
QLYAGRNSYNIQSVNIKNYFGELREDISYVYYGLYFCEFTDYMTREGNDETEMLKLLYQS
LRALLNPHIGTKLVRYIFELKIISLGGEAPQVFECLNCGTKENLSRFSASAGGCFCESCK
QKATDGKRILTSTLYTLQYIISADVEKLYNFTVTEEVFRELKQIVDCYREDRIEHRMKSL
ELLSIL
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaccggtacggttacagttacagggattgtgttagcaacaatacccatcggtgattat
gataaaagactcacgatactgacaaaagaacgtggaaaaataggagcatttgccaaaggc
gctagaagaccaaacagcgccttattggcatgctcacagccatttacgtatggagagttt
caactgtatgcaggtcgtaattcttataatattcaatctgttaacatcaagaattatttt
ggtgagctaagagaagatattagttacgtttactatggtctttatttctgtgagtttacg
gattatatgacgcgtgaaggcaatgacgaaactgagatgctaaaactactgtatcagtcc
ctcagagctttattaaatccacacattgggacaaaacttgttcggtacatttttgaatta
aagataattagcctaggtggagaggcaccgcaagtatttgaatgccttaattgtggcaca
aaggagaatttaagtagatttagtgcgagcgctggtggttgtttttgtgagagttgtaaa
caaaaggcgacggatggtaaaaggattttaacgtcaacgttatatactttacaatacata
atatcagcagatgtagagaagctatataacttcacagttacagaggaagtctttcgtgag
ttaaaacagattgtagactgttatcgggaagatcgaattgagcatcgaatgaagtcgtta
gaattactttctatcttataa
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