Lachnoclostridium phytofermentans: Cphy_0856
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Entry
Cphy_0856 CDS
T00619
Name
(GenBank) ABC transporter related
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cpy
Lachnoclostridium phytofermentans
Pathway
cpy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cpy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Cphy_0856
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpy02000
]
Cphy_0856
Transporters [BR:
cpy02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Cphy_0856
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
AAA_22
ABC_membrane_3
AAA_14
AAA_5
AAA_18
TsaE
DUF87
AAA
NTPase_1
SMC_N
AAA_23
AAA_30
AAA_29
nSTAND3
AAA_28
AAA_16
RsgA_GTPase
AAA_24
DO-GTPase2
Rad17
MMR_HSR1
AAA_RNF213_3
AAA_7
NB-ARC
Cpta_toxin
IstB_IS21
AAA_33
NACHT
Motif
Other DBs
NCBI-ProteinID:
ABX41242
UniProt:
A9KLB3
LinkDB
All DBs
Position
1092314..1094194
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AA seq
626 aa
AA seq
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MSQESNVTPKVPQRQRGPMGGGPMGGMGMGGEKAKNFKGSLKKLMSYLAPFRIQIFVVIV
FAAISTVFTIVGPKILAKATDELTSGIMGKITGKGGEIDFSYIATIMLWLVFLYVISAIF
SYMQGHLMSGVSTNIAYNLRNAIMKKMNKLPFSYYNKTSHGEVLSRITNDVDTLNMTLNQ
SITQLITSVTSVLGVLIMMLSISWKLTIIAVLILPLSVLLIIGVVKKSQKYFKGQQKYLG
RVNGHIEEMYGGHLVVKAFNGEEKSLEKFDQENEKLYESAWKSNFLSGLMMPIMNFVGNL
GYVLICIVGASMAAGGTMTIGGIQAFIQYVRSFTQPISQIANISNQIQQMVAAAERVFEF
LDENEESKDVVKVTMDDIDLKGDVTFDHVRFGYEDTDQIVIKDFSVKVKAGQKVAIVGPT
GAGKTTLVKLLMRFHDINSGDIYVDGYNTKDFSRSDLRTEFGMVLQDTWLYNGTIMDNIR
YGKLDATDEEVIKAAKAAQVDHFVRTLPDGYQMVLNEEASNISQGQKQLLTIARAILADS
KILILDEATSSVDTRTEVLIQKAMDNLMKGRTSFIIAHRLSTIRNADIILCMKDGDIVEQ
GNHDELMKLGGFYANLYNSQFEKLPA
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagaatcaaacgtaactcctaaggtaccgcagcgccagagaggaccaatgggt
ggtggtccgatgggcggcatgggaatgggtggtgagaaggcaaagaactttaagggtagt
ttaaaaaagttaatgtcatatctagcaccgtttcgtatacaaattttcgttgttattgtg
tttgcagctatctccacggtatttacaattgtaggaccaaagatattagcaaaagcaacc
gatgaattaacgagtggtatcatggggaaaatcactggaaaaggtggagaaattgatttt
tcctatatagcgactatcatgttgtggttagtatttctttatgtaataagtgccatattc
tcttatatgcaagggcatttaatgtctggagtatccacaaatatagcttataatcttaga
aatgctatcatgaagaagatgaataagctgccatttagctattataacaagaccagtcat
ggagaagtattatcaagaattacaaacgatgtagataccttaaacatgaccttaaatcaa
agtattacccaattaattacctcagttacctctgttttaggtgtattaattatgatgctc
tctatcagttggaaactaaccatcatagcggtattaatcttgccactttctgtactactg
attataggggtagtaaagaaatctcaaaaatattttaaaggtcagcaaaaataccttgga
cgtgtcaatggacatattgaagagatgtatggtggacacttggtagtaaaagcatttaat
ggagaagaaaaatctcttgaaaagtttgaccaagaaaacgaaaagctttatgagagtgct
tggaaatcaaacttcctttcaggattaatgatgccaatcatgaatttcgtaggtaatctt
ggctatgtattaatatgtattgttggtgcatcgatggcagcaggtggaaccatgacaatt
ggtggaattcaagcatttatccaatatgttcgttcctttactcagccaatctcacagatt
gctaacatttcaaatcaaattcaacagatggtagcagctgcagagcgtgtatttgaattc
ttagatgaaaacgaagaaagcaaagatgtagtaaaagttactatggacgatattgatcta
aagggtgatgtaacctttgatcatgtacgctttggttatgaggatactgatcaaatagtt
attaaagatttctctgtgaaggttaaagcaggacagaaggttgcgattgttggtccaaca
ggtgctggtaaaacaacgctggttaagttgctgatgaggttccatgatattaatagtggt
gatatctatgtagatggttataataccaaagacttctctcggtctgatcttcgtacggag
ttcggtatggttcttcaggatacttggttatataacggaaccattatggataacatccga
tatggtaagttagatgcaacagatgaagaagtaataaaagcagcgaaagctgcacaggtt
gaccactttgttcgtactttaccagatggttaccagatggttttaaacgaagaggcaagc
aatatatcacaaggtcagaaacagctattaactatagcaagagctatacttgcagattct
aagattcttattttagatgaagccacaagctctgttgataccagaacagaagtattgatt
caaaaggctatggataacttaatgaagggtagaactagctttatcatagctcaccgtctc
tcaacgattcgaaatgcagatattatcctttgtatgaaggatggcgatattgttgagcag
ggtaatcatgatgaacttatgaaacttggcggtttctatgcaaatctatataacagccag
tttgagaagttaccggcataa
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