Lachnoclostridium phytofermentans: Cphy_0879
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Entry
Cphy_0879 CDS
T00619
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cpy
Lachnoclostridium phytofermentans
Brite
KEGG Orthology (KO) [BR:
cpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpy03016
]
Cphy_0879
Enzymes [BR:
cpy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Cphy_0879
Transfer RNA biogenesis [BR:
cpy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Cphy_0879
Prokaryotic type
Cphy_0879
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
DUF4279
Motif
Other DBs
NCBI-ProteinID:
ABX41265
UniProt:
A9KLD6
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All DBs
Position
1129734..1130480
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AA seq
248 aa
AA seq
DB search
MRNIQLIIEYDGSRYDGWQKQAGNQKSITIQDKLEDVLNKMENETVTVIGAARTEAGVHA
YKQVASFMTNSKLKVYEIKQYLNRFLPRDIAVLEALEVPERFHASFNAGSFEYEYKISIG
EVPSVFERKYNYYCFKRPDIAKMKEAAKYLVGKHDFKAFSDNKRMKKSTEREIYSLEIYG
DEKEIVITVHGDDFWPHMVRIMVGTLLDVGLSKIEPMDIKRILESKDRDKAGETIEAKGL
FLTEVHYK
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatattcaattaataatagaatacgatggctctcgatatgatggctggcaaaag
caggctggaaatcagaagtctataacgattcaggataagttagaagatgttttaaataaa
atggagaacgaaaccgtcacggtcattggagcagctagaaccgaggccggggtacatgct
tacaagcaggttgctagctttatgacaaattcaaagctaaaggtttatgaaattaagcaa
tatctgaatcgctttttaccaagagatattgctgtcctagaggcattagaagtaccagag
aggttccatgcaagttttaacgcaggatcctttgagtatgaatataaaatatccattgga
gaagtaccttctgtatttgaacgcaaatataattattattgctttaaacgtccagacatt
gctaagatgaaggaagcagccaaatatctagttgggaagcatgatttcaaagctttttca
gataataaaaggatgaaaaaatctaccgagagagaaatttattctttagaaatctatggg
gatgagaaagaaatagtaataacggttcatggtgatgatttttggccacatatggtacga
attatggtaggaaccttacttgacgtgggtctatcaaaaattgaaccaatggatataaaa
agaattttagagagcaaagacagggataaagctggcgagaccatagaagcgaaaggtcta
tttttaacagaagtgcattataaataa
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