Lachnoclostridium phytofermentans: Cphy_1245
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Entry
Cphy_1245 CDS
T00619
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cpy
Lachnoclostridium phytofermentans
Brite
KEGG Orthology (KO) [BR:
cpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpy03400
]
Cphy_1245
DNA repair and recombination proteins [BR:
cpy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cphy_1245
Archaeal homologous recombinant proteins
Cphy_1245
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Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Metallophos_3
Response_reg
Glyco_tran_WecG
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
ABX41623
UniProt:
A9KNM2
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All DBs
Position
1571956..1573083
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AA seq
375 aa
AA seq
DB search
MKFMHLSDLHIGKRVNEFSMIEDQTYILQKILELADEEKPDAVLIAGDVYDKNLPTIEGV
NLLDDFLSDLHKRKIPVFMISGNHDSAERLNFASRILRNNEVYIAGTYQGEIARYTLNDG
HGPVNIYLLPFVKPAIASVYHEGIESYHDAVKAILAAAKVNKAERNILVAHQFVTAGDIS
PECCDSENISVGGLDNVDVSVFDDFEYVALGHLHGPQRIGRDTVRYAGSPLKYSFSEAKQ
KKSVTMVTIDTKGEIKQEYIPLIPLRDMRQLKGPIDELLNPKNYHNGNTKDYIHATLTDE
EEIYDAIGRIRSIYPNVMRIEFDNSKTKPNETAKLVAEDVIRKDPLCLFEEFFKNQNNVS
MSDEQNEIMKKLLFE
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatgcatttatcggacttgcatattggaaaaagagtaaatgagttttcaatg
atagaagaccagacatatatcttacaaaagattttggaacttgcagatgaggaaaaacca
gatgcagtactgattgctggtgatgtgtacgataagaatctaccgacgatagaaggagtt
aatttgttagatgatttcttatcagacttacataaacgtaagattccagtatttatgatt
agcggaaatcatgattctgctgagcgacttaattttgcaagccgtattttaagaaataat
gaagtttatatagcaggtacttatcaaggggagatcgcgcgatatacattaaatgatgga
catggtccagtcaatatctatctgttgccatttgtaaagcctgccattgcttcggtgtat
cacgagggaatagagtcctatcatgatgcggtgaaggcgattcttgcagcagcgaaggta
aataaagcggagagaaatattcttgtggcacatcaatttgtaaccgcaggggatatttca
ccagagtgctgtgattctgaaaacatatcagtcggagggcttgataatgtcgatgtaagt
gtatttgatgattttgaatatgttgcattaggacaccttcatggaccacagcgaattgga
agagatacggttcgttatgcaggttctccactaaaatactccttttcggaagcgaaacag
aaaaaatctgtaactatggtaacgattgataccaagggggagattaaacaggaatatatt
cctttgattccattaagagatatgcgtcagttaaaagggccaattgatgaacttctgaat
ccgaagaactaccacaatgggaatacaaaggactatattcatgcgacattaactgatgaa
gaggaaatctatgatgcaattggacggattcgtagtatttatccaaatgtaatgcggatt
gaatttgataacagtaagacaaagccaaatgagacagcaaaactggtagctgaggatgtt
attagaaaagaccctctttgtttatttgaagagtttttcaagaatcagaataatgtttct
atgtccgacgagcagaatgaaatcatgaaaaaactactgtttgagtaa
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